نتایج جستجو برای: tef1 gene

تعداد نتایج: 1141462  

Journal: :mycologia iranica 2015
fahimeh mirkhani hossein alaei

in the present study, the diversity of trichoderma spp. was investigated in alkaline pistachio soils at different geographic area in kerman province, iran. a total of 161 trichoderma isolates were obtained and identified at the species level by analysis of their morphological characters and sequence analysis of their internal transcribed spacer regions of the rrna cluster and tef1 genes as phyl...

Journal: :Molecular phylogenetics and evolution 2007
P Brandon Matheny Zheng Wang Manfred Binder Judd M Curtis Young Woon Lim R Henrik Nilsson Karen W Hughes Valérie Hofstetter Joseph F Ammirati Conrad L Schoch Ewald Langer Gitta Langer David J McLaughlin Andrew W Wilson Tobias Frøslev Zai-Wei Ge Richard W Kerrigan Jason C Slot Zhu-Liang Yang Timothy J Baroni Michael Fischer Kentaro Hosaka Kenji Matsuura Michelle T Seidl Jukka Vauras David S Hibbett

A phylogeny of the fungal phylum Basidiomycota is presented based on a survey of 160 taxa and five nuclear genes. Two genes, rpb2, and tef1, are presented in detail. The rpb2 gene is more variable than tef1 and recovers well-supported clades at shallow and deep taxonomic levels. The tef1 gene recovers some deep and ordinal-level relationships but with greater branch support from nucleotides com...

Journal: :دانش گیاه پزشکی ایران 0
مهدی مهرابی کوشکی گروه گیاه پزشکی، دانشکدۀ کشاورزی، دانشگاه شهید چمران اهواز مریم باورساد گروه گیاه پزشکی، دانشکدۀ کشاورزی، دانشگاه شهید چمران اهواز رضا فرخی نژاد گروه گیاه پزشکی، دانشکدۀ کشاورزی، دانشگاه شهید چمران اهواز مهدی جمشیدی گروه گیاه پزشکی، دانشکدۀ کشاورزی، دانشگاه شهید چمران اهواز اشکان علی محمدی گروه گیاه پزشکی، دانشکدۀ کشاورزی، دانشگاه شهید چمران اهواز

genus trichoderma is a monophyletic fungus which some their species is known as biocontrol agent. this study was carried out for phylogenetic analysis of some isolates of the genus trichoderma. in this study 73 sequences (including 33 sequences from t. aspereluum, t. brevicompactum, t. capillare, t. harzianum, t. koningiopsis, t. pleuroticola and t. virens and 40 sequences obtained from geneban...

Journal: :Applied and environmental microbiology 2006
Elke Nevoigt Jessica Kohnke Curt R Fischer Hal Alper Ulf Stahl Gregory Stephanopoulos

The strong overexpression or complete deletion of a gene gives only limited information about its control over a certain phenotype or pathway. Gene function studies based on these methods are therefore incomplete. To effect facile manipulation of gene expression across a full continuum of possible expression levels, we recently created a library of mutant promoters. Here, we provide the detaile...

Journal: :Studies in Mycology 2006
Barrie E. Overton Elwin L. Stewart David M. Geiser Walter M. Jaklitsch

Morphological studies and phylogenetic analyses of DNA sequences from three genomic regions - the internal transcribed spacer (ITS) regions of the nuclear ribosomal gene repeat, a partial sequence of RNA polymerase II subunit (rpb2), and a partial sequence of translation elongation factor (tef1) - were used to investigate the systematics of Hypocrea citrina and related species. A neotype specim...

Journal: :Applied and environmental microbiology 1995
T Nakari-Setälä M Penttilä

The filamentous fungus Trichoderma reesei was shown to secrete active cellobiohydrolase I and the endoglucanase I catalytic core domain into the culture medium when the fungus was grown on glucose-containing medium. The expression of the proteins was driven by the promoters of the elongation factor 1 alpha, tef1, and the unidentified gene for cDNA1. The cDNA1 promoter gave the best yields. The ...

Journal: :Applied biochemistry and biotechnology 2008
Ju Yun Bae José Laplaza Thomas W Jeffries

Orientation of adjacent genes has been reported to affect their expression in eukaryotic systems, and metabolic engineering also often makes repeated use of a few promoters to obtain high expression. To improve transcriptional control in heterologous expression, we examined how these factors affect gene expression and enzymatic activity in Saccharomyces cerevisiae. We assembled D-xylose reducta...

Journal: :Mycologia 2014
Alexis Carlson Alfredo Justo David S Hibbett

Trametes is a cosmopolitan genus of white rot polypores, including the "turkey tail" fungus, T. versicolor. Although Trametes is one of the most familiar genera of polypores, its species-level taxonomy is unsettled. The ITS region is the most commonly used molecular marker for species delimitation in fungi, but it has been shown to have a low molecular variation in Trametes resulting in poorly ...

Journal: :Applied and environmental microbiology 1999
N Kitamoto S Yoshino K Ohmiya N Tsukagoshi

beta-Xylosidase secreted by the shoyu koji mold, Aspergillus oryzae, is the key enzyme responsible for browning of soy sauce. To investigate the role of beta-xylosidase in the brown color formation, a major beta-xylosidase, XylA, and its encoding gene were characterized. beta-Xylosidase XylA was purified to homogeneity from culture filtrates of A. oryzae KBN616. The optimum pH and temperature o...

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