نتایج جستجو برای: subgenotyping

تعداد نتایج: 13  

2002
Scott Glaberman John E. Moore Colm J. Lowery Rachel M. Chalmers Irshad Sulaiman Kristin Elwin Paul J. Rooney Beverley C. Millar James S.G. Dooley Altaf A. Lal Lihua Xiao

Three recent drinking-water-associated cryptosporidiosis outbreaks in Northern Ireland were investigated by using genotyping and subgenotyping tools. One Cryptosporidium parvum outbreak was caused by the bovine genotype, and two were caused by the human genotype. Subgenotyping analyses indicate that two predominant subgenotypes were associated with these outbreaks and had been circulating in th...

2012
Weifeng Shi Chaodong Zhu Weimin Zheng Wei Zheng Cheng Ling Michael J. Carr Desmond G. Higgins Zhong Zhang

BACKGROUND More than ten subgenotypes of genotype C Hepatitis B virus (HBV) have been reported, including C1 to C16 and two C/D recombinant subgenotypes (CD1 and CD2), however, inconsistent designations of these subgenotypes still exist. METHODOLOGY/PRINCIPAL FINDINGS We performed a phylogenetic analysis of all full-length genotype C HBV genome sequences to correct the misclassifications of H...

Journal: :Journal of clinical microbiology 2010
Sitara Swarna Rao Ajjampur Farzana Begum Liakath Arun Kannan Priya Rajendran Rajiv Sarkar Prabhakar Devarajan Moses Anna Simon Indira Agarwal Ann Mathew Roberta O'Connor Honorine Ward Gagandeep Kang

Cryptosporidium spp., a common cause of diarrhea in children, were investigated in the first multisite study in India. Diarrheal stools from hospitalized children aged <5 years from Delhi, Trichy, and Vellore were analyzed by microscopy, PCR-restriction fragment length polymorphism (RFLP), and/or sequencing at the small-subunit (SSU) rRNA and Cpgp40/15 loci for species determination and subgeno...

Journal: :iranian journal of parasitology 0
salman ghaffari dept. of parasitology and mycology, school of medicine, babol university of medical sciences, babol, iran. narges kalantari cellular and molecular biology research centre, babol university of medical , babol, iran.

background: cryptosporidium species are important cause of diarrheal diseases in both developing and developed countries. this study aimed to compare the perfor-mance of several molecular methods for identification of cryptosporidium species, and to detect genetic variation among each of these species isolated from iran, ma-lawi, nigeria, vietnam and the united kingdom. methods: the oocysts dna...

Journal: :The Southeast Asian journal of tropical medicine and public health 2011
Suradej Siripattanapipong Saovanee Leelayoova Mathirut Mungthin R C Andrew Thompson Parima Boontanom Wilai Saksirisamphant Peerapan Tan-Ariya

Small subunit ribosomal DNA (SSU-rDNA), glutamate dehydrogenase (gdh), beta-giardin, triosephosphate isomerase (tpi), and elongation factor 1-alpha (ef1-alpha) genes are useful genetic markers for genotypic analysis of the intestinal protozoan, Giardia duodenalis (syn. G. lamblia, G. intestinalis), the cause of enteric disease in humans. To quantitatively compare the discriminatory power of the...

2011
F DEL CHIERICO M ONORI S DI BELLA E BORDI N PETROSILLO D MENICHELLA S M CACCIÒ F CALLEA L PUTIGNANI

Nine cases of cryptosporidiosis co-infections in AIDS patients were clinically categorised into severe (patients 1, 3, 8 and 9), moderate (patients 4 and 5) and mild (patients 2, 6 and 7). Formalin-fixed faecal specimens from these patients were treated to obtain high quality DNA competent for amplification and sequencing of the 60-kDa glycoprotein (GP60) gene. Sequence analysis revealed that o...

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