Voltage imaging using genetically encoded voltage indicators (GEVIs) has taken the field of neuroscience by storm in past decade. Its ability to create subcellular and network level readouts electrical dynamics depends critically on kinetics response indicator used. Engineered microbial rhodopsins form a GEVI subclass known for their high sensitivity fast kinetics. Here we review essential aspe...

We report a multi-scale simulation study of the photocycle of the rhodopsins. The quasi-atomistic representation ("united atoms" UA) of retinal is combined with a minimalist coarse grained (CG, one-bead-per amino acid) representation of the protein, in a hybrid UA/CG approach, which is the homolog of QM/MM, but at lower resolution. An accurate multi-stable parameterization of the model allows s...

bacteriorhodopsin operates as a light/proton transfer pump which converts the light energy into a proton gradient. energy stored in the proton gradient can be used in a variety of ways. bacteriorhodopsin producing sources are some halobacterium species such as halobacterium sodomense and halobacterium salinarum which continue to grow in harsh and salt-saturated conditions. two types of red pigm...

bacteriorhodopsin operates as a light/proton transfer pump which converts the light energy into a proton gradient. energy stored in the proton gradient can be used in a variety of ways. bacteriorhodopsin producing sources are some halobacterium species such as halobacterium sodomense and halobacterium salinarum which continue to grow in harsh and salt-saturated conditions. two types of red pigm...

PURPOSE Most transgenic animal models of retinal degeneration caused by rhodopsin mutations express the rhodopsin transgene on a wild-type (WT) genetic background. Previous studies have demonstrated that one mechanism of retinal degeneration is rhodopsin overexpression. To study the effect of C-terminal truncation of rhodopsin without the confounding factors of overexpression, several lines of ...

Rhodopsin is trafficked to the rod outer segment of vertebrate rod cells with high fidelity. When rhodopsin transport is disrupted retinal photoreceptors apoptose, resulting in the blinding disease autosomal dominant retinitis pigmentosa. Herein, we introduce rhodopsin-photoactivatable GFP-1D4 (rhodopsin-paGFP-1D4) for the purposes of monitoring rhodopsin transport in living cells. Rhodopsin-pa...

Rod outer segment disk membranes are densely packed with rhodopsin. The recent notion of raft or microdomain structures in disk membranes suggests that the local density of rhodopsin in disk membranes could be much higher than the average density corresponding to the lipid/protein ratio. Little is known about the effect of high packing density of rhodopsin on the structure and function of rhodo...

PURPOSE In this study we investigated the biochemical and cell biologic characteristics of flies expressing two novel dominant alleles of the major rhodopsin encoding gene neither inactivation nor afterpotential E (ninaE) in a heterozygous background. METHODS Presence of the deep pseudopupil in flies was assayed 5 days post eclosion. For structural analysis, 1-μm-retinal cross sections were o...

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