نتایج جستجو برای: hcp5

تعداد نتایج: 58  

Journal: :The Journal of antimicrobial chemotherapy 2010
Sonia Rodríguez-Nóvoa Lorena Cuenca Judit Morello Mateo Córdoba Francisco Blanco Inmaculada Jiménez-Nácher Vincent Soriano

OBJECTIVES To study the correlation between the HLA-B*5701 allele and the single nucleotide polymorphism in HCP5 (rs2395029). PATIENTS AND METHODS All HIV patients naive for abacavir seen at our institution between September 2007 and December 2008 were prospectively screened for HLA-B*5701. HCP5 rs2395029 genotyping was carried out by allelic discrimination using the TaqMan 5'-nuclease assay....

Journal: :Pharmacogenomics 2011
Francisco Sanchez-Giron Beatriz Villegas-Torres Karla Jaramillo-Villafuerte Irma Silva-Zolezzi Juan Carlos Fernandez-Lopez Gerardo Jimenez-Sanchez Alessandra Carnevale

UNLABELLED Prospective screening for HLA-B*5701 decreases or abolishes abacavir hypersensitivity reaction. In Caucasians, the HLA complex protein 5 gene (HCP5) rs2395029(G) allele is in complete linkage disequilibrium (LD) with HLA-B*5701 (r(2) = 1). AIM To assess the frequency of HLA-B*5701 and its LD with HCP5 rs2395029(G) allele, to extend our knowledge of genetic variants that are of crit...

Journal: :PLoS ONE 2008
Gabriel Catano Hemant Kulkarni Weijing He Vincent C. Marconi Brian K. Agan Michael Landrum Stephanie Anderson Judith Delmar Vanessa Telles Li Song John Castiblanco Robert A. Clark Matthew J. Dolan Sunil K. Ahuja

A recent genome-wide association study (GWAS) suggested that polymorphisms in or around the genes HCP5, HLA-C and ZNRD1 confer restriction against HIV-1 viral replication or disease progression. Here, we also find that these alleles are associated with different aspects of HIV disease, albeit mainly in European Americans. Additionally, we offer that because the GWAS cohort was a subset of HIV-p...

Journal: :The Journal of infectious diseases 2008
Sara Colombo Andri Rauch Margalida Rotger Jacques Fellay Raquel Martinez Christoph Fux Christine Thurnheer Huldrych F Günthard David B Goldstein Hansjakob Furrer Amalio Telenti

The HLA-B 5701 allele is predictive of hypersensitivity reaction to abacavir, a response herein termed "ABC-HSR." This study of 1,103 individuals infected with human immunodeficiency virus assessed the usefulness of genotyping a HCP5 single-nucleotide polymorphism (SNP), rs2395029, in relation to ABC-HSR. In populations with European ancestry, rs2395029 is in linkage disequilibrium with HLA-B 5...

Journal: :The Journal of infectious diseases 2009
Sophie Limou Sigrid Le Clerc Cédric Coulonges Wassila Carpentier Christian Dina Olivier Delaneau Taoufik Labib Lieng Taing Rob Sladek Christiane Deveau Rojo Ratsimandresy Matthieu Montes Jean-Louis Spadoni Jean-Daniel Lelièvre Yves Lévy Amu Therwath François Schächter Fumihiko Matsuda Ivo Gut Philippe Froguel Jean-François Delfraissy Serge Hercberg Jean-François Zagury

To elucidate the genetic factors predisposing to AIDS progression, we analyzed a unique cohort of 275 human immunodeficiency virus (HIV) type 1-seropositive nonprogressor patients in relation to a control group of 1352 seronegative individuals in a genomewide association study (GWAS). The strongest association was obtained for HCP5 rs2395029 (P=6.79x10(-10); odds ratio, 3.47) and was possibly l...

2014
Cinzia Ciccacci Carlo Perricone Fulvia Ceccarelli Sara Rufini Davide Di Fusco Cristiano Alessandri Francesca Romana Spinelli Enrica Cipriano Giuseppe Novelli Guido Valesini Paola Borgiani Fabrizio Conti

BACKGROUND Systemic lupus erythematosus (SLE) is an autoimmune disease with complex pathogenesis in which genes and environmental factors are involved. We aimed at analyzing previously identified loci associated with SLE or with other autoimmune and/or inflammatory disorders (STAT4, IL10, IL23R, IRAK1, PSORS1C1, HCP5, MIR146a, PTPN2, ERAP1, ATG16L1, IRGM) in a sample of Italian SLE patients in ...

2016
Joyce Siew Yong Low Yoon Ming Chin Taisei Mushiroda Michiaki Kubo Gopala Krishnan Govindasamy Kin Choo Pua Yoke Yeow Yap Lee Fah Yap Selva Kumar Subramaniam Cheng Ai Ong Tee Yong Tan Alan Soo Beng Khoo Ching Ching Ng Qian Tao

BACKGROUND Nasopharyngeal carcinoma (NPC) is a neoplasm of the epithelial lining of the nasopharynx. Despite various reports linking genomic variants to NPC predisposition, very few reports were done on copy number variations (CNV). CNV is an inherent structural variation that has been found to be involved in cancer predisposition. METHODS A discovery cohort of Malaysian Chinese descent (NPC ...

2017
T-G. Zhu X. Xiao Q. Wei M. Yue L-X. Zhang

In our study, we aimed to reveal potential long non-coding RNAs (lncRNA) biomarkers in lung adenocarcinoma (LAD) using lncRNA-mediated competing endogenous RNAs (ceRNAs) network (LMCN). Competing lncRNA-mRNA interactions were identified using the hypergeometric test. Co-expression analysis for the competing lncRNA-mRNA interactions was implemented, and relying on the weight value >0.8, a highly...

2014
Sukasem Chonlaphat Chonlaphat SUKASEM Napatrupron Koomdee Siwalee Santon Montri Chamnanphon Thawinee Jantararoungtong

Abacavir hypersensitivity reaction (ABC-HSR) is associated with the presence of HLA-B*5701 allele. Alternative tests for ABC-HSR associated allele determination are needed where sequence-based HLA typing is not available, particularly in resource-limited settings or developing countries. This study focused on the development and evaluation of two HLA-B*5701 tagging SNPs (single nucleotide polym...

Journal: :The Journal of infectious diseases 2010
Sophie Limou Cédric Coulonges Joshua T Herbeck Daniëlle van Manen Ping An Sigrid Le Clerc Olivier Delaneau Gora Diop Lieng Taing Matthieu Montes Angélique B van't Wout Geoffrey S Gottlieb Amu Therwath Christine Rouzioux Jean-François Delfraissy Jean-Daniel Lelièvre Yves Lévy Serge Hercberg Christian Dina John Phair Sharyne Donfield James J Goedert Susan Buchbinder Jérôme Estaquier François Schächter Ivo Gut Philippe Froguel James I Mullins Hanneke Schuitemaker Cheryl Winkler Jean-François Zagury

BACKGROUND The compilation of previous genomewide association studies of AIDS shows a major polymorphism in the HCP5 gene associated with both control of the viral load and long-term nonprogression (LTNP) to AIDS. METHODS To look for genetic variants that affect LTNP without necessary control of the viral load, we reanalyzed the genomewide data of the unique LTNP Genomics of Resistance to Imm...

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