Here, we report on the synthesis, conformational analysis, and autoantibody binding properties of new sets of rheumatoid arthritis (RA) specific biotin-peptide conjugates derived from filaggrin epitope peptides. The biotin with or without a linker was attached to the Cit or Arg containing epitope core ((311)TXGRS(315)) or epitope region ((306)SHQESTXGXSXGRSGRSGS(324)) peptide (where X = Cit), t...

Predicting of conformational epitope is one of the major challenge in the field of vaccine design. Several methods have been developed for predicting conformational epitope but that methods have mostly been based on protein sequence and not very effective. This is the first attempt in this are to predict conformational epitope using fuzzy inference system mamdani. The proposed method based on a...

Human papillomavirus type 16 (HPV-16) is a major cause of human cancer. Effective prophylactic vaccines are based on type-specific neutralizing antibodies. A major neutralizing epitope has been defined by the monoclonal antibody H16.V5. To investigate the importance of this epitope for overall immunogenicity of HPV-16, HPV-16 virus-like particles devoid of the H16.V5 epitope were engineered by ...

Recently, an HLA-B*3501-restricted cytotoxic T-lymphocytes (CTL) epitope in the nucleoprotein (NP418–426) of influenza A viruses was identified, which exhibited a high degree of variability. In the present study, the recognition of epitope variants by human cytotoxic Tlymphocytes (CTL) was investigated. Human CD8+ CTL clones were specific for NP418–426 epitope variants within one subtype of inf...

To investigate possible mechanisms behind HIV-1 escape from CTL, we performed detailed longitudinal analysis of Gag (SLYNTVATL)- and RT (ILKEPVHGV)-specific CTL responses and plasma epitope sequences in five individuals. Among those with CTL against consensus epitope sequences, epitope mutations developed over several years, invariably followed by decay of the CTL targeting the consensus epitop...

We selected a novel biotin-binding peptide for sensing biotin, biotinylated proteins, and nucleotides. From 15-mer library displayed on the RNA coliphage Qβ, 15-amino acid long (HGHGWQIPVWPWGQG) hereby referred to as nanotag was identified selectively bind biotin. The target selection achieved through panning with elution by infection. tested transducer an immunogenic epitope of foot-and-mouth ...

background and aims: the contribution genetic and antigenic diversity of h9n2 influenza viruses in evading from immune responses, cytotoxic t lymphocytes (ctl) epitopes in hemagglutinin (ha) protein restricted by hla binding peptides was identified. materials and methods: phylogenetic analyses were carried out for all of full length ha and deduced amino acid sequences of h9n2 viruses available ...

introduction: acinetobacter baumannii is associated with hospital-acquired infections. outer membrane protein a of a.baumannii (abompa) is a well-characterized virulence factor which has important roles in pathogenesis of this bacterium. methods: based on our pcr-sequencing of ompa gene in the clinical isolates, abompa protein can be categorized into two types, named here type-1 and type-2. we ...

As the $100B therapeutic monoclonal antibody (mAb) market continues to grow, developers of therapeutic mAbs increasingly face the need to strengthen patent protection of their products and enforce their patents in courts. In view of changes in the patent law landscape, patent applications are strategically using information on the precise binding sites of their mAbs, i.e., the epitopes, to supp...

In the present study, the recognition of epitope variants of influenza A viruses by human CTL was investigated. To this end, human CD8(+) CTL clones, specific for natural variants of the HLA-B*3501-restricted epitope in the nucleoprotein (NP(418-426)), were generated. As determined in (51)Cr release assays and by flow cytometry with HLA-B*3501-peptide tetrameric complexes, CTL clones were found...