BLAST is a tool for finding biologically similar sequences to given query sequences in annotated sequence database. Since the number of sequences in the database increases at exponential rate, and the number of users drastically increases, the performance of BLAST is a primary concern to service sites like NCBI. NCBI developed a parallel BLAST for the speedup of BLAST using threads on SMP machi...

  Purpose: In recent years high explosive bomb attacks have been increasingly directed against   civil structures by various terrorist organizations. This paper describes a numerical method for   assessing the interaction of high explosive air blast within the complex geometrical type of a   congested urban environment.   Materials and Methods: The first step in predicting blast effects on a ta...

Although blast-induced traumatic brain injury (bTBI) is well recognized for its significance in the military population, the unique mechanisms of primary bTBI remain undefined. Animate models of primary bTBI are critical for determining these potentially unique mechanisms, but the biomechanical characteristics of many bTBI models are poorly understood. In this study, we examine some common shoc...

We have developed a software called pp-Blast that uses the publicly available Blast package and PVM (parallel virtual machine) to partition a multi-sequence query across a set of nodes with replicated or shared databases. Benchmark tests show that pp-Blast running in a cluster of 14 PCs outperformed conventional Blast running in large servers. In addition, using pp-Blast and the cluster we were...

background many industrial devices have an excessive vibration which can affect human body systems. the effect of vibration on cochlear histology has been as a debatable problem in occupational health and medicine. objectives due to limitation present in human studies, the research was conducted to survey the influence of vibration on cochlear histology in an animal model. materials and methods...

vibration generated by vehicles during road transport has an important effect on the agricultural products damage process, particularly vegetable and fruit. modulus of elasticity is one of the most important mechanical properties of fruits and its variation can be described as one of the damage criteria during transportation. this research was conducted to evaluate the effects of vibration para...

The prevalence of blast induced traumatic brain injury in conflicts in Iraq and Afghanistan has motivated laboratory scale experiments on biomedical effects of blast waves and studies of blast wave transmission properties of various materials in hopes of improving armor design to mitigate these injuries. This paper describes the design and performance of a table-top shock tube that is more conv...

Blast is an economically important disease of rice. To map genes controlling blast resistance, recombinant inbred lines (RIL) were developed from Khao Dawk Mali 105, an aromatic, blast-susceptible cultivar and the blast resistance donor, CT 9993-5-10-M (CT). A linkage map encompassing 2112 cM was constructed from 141 RILs using 90 restriction fragment length polymorphisms (RFLPs) and 31 simple ...

Blast wave overpressure has been associated with varying levels of traumatic brain injury in soldiers exposed to blast loading. In realistic blast loading scenarios, the mechanisms of primary blast injury are not well known due to the complex interactions of the blast wave with the human body, and the high acceleration experienced over very short time durations. The purpose of this study was to...