نتایج جستجو برای: n50

تعداد نتایج: 630  

2017
Paul G. Schaberg Paula F. Murakami John R. Butnor Gary J. Hawley

Autumnal leaf anthocyanin expression is enhanced following exposure to a variety of environmental stresses and may represent an adaptive benefit of protecting leaves from those stresses, thereby allowing for prolonged sugar and nutrient resorption. Past work has shown that experimentally induced sugar accumulations following branch girdling triggers anthocyanin biosynthesis. We hypothesized tha...

2016
Ashok Ganapathy Sridhar Jayavel Sivakumar Natesan

Planococcus maritimus MKU009 is a Gram positive cocci and a moderate halophilic bacterium isolated from marine water of Pichavaram, South East Coast of India. Here we report the draft genome of Planococcus maritimus MKU009 with a total size of 3,251,644 bp with N50 value of 1681571 bp. The overall G+C content of the genome was 47.27%. The carotenoid producing crtN, crtB, crtP and crtI genes wer...

2017
Samantha J Jones Martin Haulena Gregory A Taylor Simon Chan Steven Bilobram René L Warren S Austin Hammond Karen L Mungall Caleb Choo Heather Kirk Pawan Pandoh Adrian Ally Noreen Dhalla Angela K Y Tam Armelle Troussard Daniel Paulino Robin J N Coope Andrew J Mungall Richard Moore Yongjun Zhao Inanc Birol Yussanne Ma Marco Marra Steven J M Jones

The northern sea otter inhabits coastal waters of the northern Pacific Ocean and is the largest member of the Mustelidae family. DNA sequencing methods that utilize microfluidic partitioned and non-partitioned library construction were used to establish the sea otter genome. The final assembly provided 2.426 Gbp of highly contiguous assembled genomic sequences with a scaffold N50 length of over...

2000
D. C. Marinescu J. J. Quinn Gabriele F. Giuliani

The subband levels of quantum wells grown in a periodic array form minibands whose bandwidth D depends on the probability of interlayer tunneling. In the presence of a strong magnetic field, this system of minibands can exhibit various Coulomb-interaction-driven spin polarization instabilities at an integral value of the filling factor n . We investigate in particular the Hartree-Fock phase dia...

Journal: :Genome research 2010
Ruiqiang Li Hongmei Zhu Jue Ruan Wubin Qian Xiaodong Fang Zhongbin Shi Yingrui Li Shengting Li Gao Shan Karsten Kristiansen Songgang Li Huanming Yang Jian Wang Jun Wang

Next-generation massively parallel DNA sequencing technologies provide ultrahigh throughput at a substantially lower unit data cost; however, the data are very short read length sequences, making de novo assembly extremely challenging. Here, we describe a novel method for de novo assembly of large genomes from short read sequences. We successfully assembled both the Asian and African human geno...

Journal: :Data 2022

Cimex hemipterus, a blood-feeding ectoparasite commonly found in tropical regions, is notorious household pest. The draft genome assembly of C. hemipterus presented this study, generated using SPAdes software with Illumina short reads. obtained size was 388.66 Mb contig N50 3503 bp. BUSCO assessment indicated that 96.71% the expected Insecta lineage genes were complete assembly. Annotation iden...

محمد یزدانی, محمدعلی بهمنیار همت اله پیردشتی,

به­ منظور بررسی اثرات کودهای زیستی حل‌کننده فسفات و باکتری‌های افزاینده رشد گیاه بر شاخص‌های رشد ذرت سینگل‌کراس 604، آزمایشی در سال زراعی 1387 در قالب کرت‌های خرد شده با طرح پایه بلوک کامل تصادفی با سه تکرار در مزرعه پژوهشی دانشگاه علوم کشاورزی و منابع طبیعی ساری به اجرا درآمد. عامل اصلی شامل کود دامی گاوی (به میزان بیست تن در هکتار)، کود سبز جو (به میزان پانزده تن در هکتار)، و شاهد (بدون استفا...

2017
Christopher M. Austin Mun Hua Tan Katherine A. Harrisson Yin Peng Lee Laurence J. Croft Paul Sunnucks Alexandra Pavlova Han Ming Gan

One of the most iconic Australian fish is the Murray cod, Maccullochella peelii (Mitchell 1838), a freshwater species that can grow to ∼1.8 metres in length and live to age ≥48 years. The Murray cod is of a conservation concern as a result of strong population contractions, but it is also popular for recreational fishing and is of growing aquaculture interest. In this study, we report the whole...

2013
Costas Bouyioukos Matthew J. Moscou Nicolas Champouret Inmaculada Hernández-Pinzón Eric R. Ward Brande B. H. Wulff

Aegilops sharonensis Eig (Sharon goatgrass) is a wild diploid relative of wheat within the Sitopsis section of Aegilops. This species represents an untapped reservoir of genetic diversity for traits of agronomic importance, especially as a source of novel disease resistance. To gain a foothold in this genetic resource, we sequenced the cDNA from leaf tissue of two geographically distinct Ae. sh...

2013
Tsunglin Liu Cheng-Hung Tsai Wen-Bin Lee Jung-Hsien Chiang

Next-Generation-Sequencing is advantageous because of its much higher data throughput and much lower cost compared with the traditional Sanger method. However, NGS reads are shorter than Sanger reads, making de novo genome assembly very challenging. Because genome assembly is essential for all downstream biological studies, great efforts have been made to enhance the completeness of genome asse...

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