نتایج جستجو برای: somatic mutation

تعداد نتایج: 325275  

Journal: :Proceedings of the National Academy of Sciences of the United States of America 2002
Tian-Li Wang Carlo Rago Natalie Silliman Janine Ptak Sanford Markowitz James K V Willson Giovanni Parmigiani Kenneth W Kinzler Bert Vogelstein Victor E Velculescu

Although a small fraction of human cancers have increased rates of somatic mutation because of known deficiencies in DNA repair, little is known about the prevalence of somatic alterations in the vast majority of human cancers. To systematically assess nonsynonymous somatic alterations in colorectal neoplasia, we used DNA sequencing to analyze approximately 3.2 Mb of coding tumor DNA comprising...

2016
Adam Shlien Keiran Raine Fabio Fuligni Roland Arnold Serena Nik-Zainal Serge Dronov Lira Mamanova Andrej Rosic Young Seok Ju Susanna L. Cooke Manasa Ramakrishna Elli Papaemmanuil Helen R. Davies Patrick S. Tarpey Peter Van Loo David C. Wedge David R. Jones Sancha Martin John Marshall Elizabeth Anderson Claire Hardy Violetta Barbashina Samuel A.J.R. Aparicio Torill Sauer Øystein Garred Anne Vincent-Salomon Odette Mariani Sandrine Boyault Aquila Fatima Anita Langerød Åke Borg Gilles Thomas Andrea L. Richardson Anne-Lise Børresen-Dale Kornelia Polyak Michael R. Stratton Peter J. Campbell

Disordered transcriptomes of cancer encompass direct effects of somatic mutation on transcription, coordinated secondary pathway alterations, and increased transcriptional noise. To catalog the rules governing how somatic mutation exerts direct transcriptional effects, we developed an exhaustive pipeline for analyzing RNA sequencing data, which we integrated with whole genomes from 23 breast ca...

Journal: :Proceedings of the National Academy of Sciences of the United States of America 2013
Jared J Gartner Stephen C J Parker Todd D Prickett Ken Dutton-Regester Michael L Stitzel Jimmy C Lin Sean Davis Vijaya L Simhadri Sujata Jha Nobuko Katagiri Valer Gotea Jamie K Teer Xiaomu Wei Mario A Morken Umesh K Bhanot Guo Chen Laura L Elnitski Michael A Davies Jeffrey E Gershenwald Hannah Carter Rachel Karchin William Robinson Steven Robinson Steven A Rosenberg Francis S Collins Giovanni Parmigiani Anton A Komar Chava Kimchi-Sarfaty Nicholas K Hayward Elliott H Margulies Yardena Samuels

Synonymous mutations, which do not alter the protein sequence, have been shown to affect protein function [Sauna ZE, Kimchi-Sarfaty C (2011) Nat Rev Genet 12(10):683-691]. However, synonymous mutations are rarely investigated in the cancer genomics field. We used whole-genome and -exome sequencing to identify somatic mutations in 29 melanoma samples. Validation of one synonymous somatic mutatio...

Journal: :Archives of ophthalmology 2011
Matthew J Thurtell Valérie Biousse Nancy J Newman

tein is possible. It is difficult to propose that the complete unilaterality of the disease in this patient is due to differences in environmental or genetic exposures between the two eyes. One possibility might be a somatic mutation in a progenitor cell during the development of the unaffected retinal tissue that ameliorates the effect of the mutation. To conclude, this represents the first re...

2014
Han-Joon Kim Beom S. Jeon

Mutations causing genetic disorders can occur during mitotic cell division after fertilization, which is called somatic mutations. This leads to somatic mosaicism, where two or more genetically distinct cells are present in one individual. Somatic mutations are the most well studied in cancer where it plays an important role and also have been associated with some neurodegenerative disorders. T...

Journal: :Cancer research 1996
C Eng L M Mulligan C S Healey C Houghton A Frilling F Raue G A Thomas B A Ponder

Mutations in the RET proto-oncogene are associated with the pathogenesis of medullary thyroid carcinoma (MTC). In an attempt to understand this process, we examined microdissected subpopulations from MTC and multiple metastases from these tumors. Approximately 80% of sporadic MTC's had at least one subpopulation with the RET codon 918 mutation, which is a mutation previously detected in sporadi...

Journal: :Haematologica 2013
Jason D Merker Krishna M Roskin Dana Ng Cuiping Pan Dianna G Fisk Jasmine J King Ramona Hoh Michael Stadler Lawrence M Okumoto Parveen Abidi Rhonda Hewitt Carol D Jones Linda Gojenola Michael J Clark Bing Zhang Athena M Cherry Tracy I George Michael Snyder Scott D Boyd James L Zehnder Andrew Z Fire Jason Gotlib

In order to identify novel somatic mutations associated with classic BCR/ABL1-negative myeloproliferative neoplasms, we performed high-coverage genome sequencing of DNA from peripheral blood granulocytes and cultured skin fibroblasts from a patient with MPL W515K-positive primary myelofibrosis. The primary myelofibrosis genome had a low somatic mutation rate, consistent with that observed in si...

Journal: :International Journal of Molecular Sciences 2021

Mutations in the BRCA1 and BRCA2 genes are known risk factors drivers of breast ovarian cancers. So far, few studies have been focused on understanding differences transcriptome functional landscapes associated with disease (breast vs. cancers), gene (BRCA1 BRCA2), mutation type (germline somatic). In this study, we were aimed at systemic evaluation association germline somatic mutations expres...

2015
Yukun Chen Jingchun Sun Liang-Chin Huang Hua Xu Zhongming Zhao

An accurate classification of human cancer, including its primary site, is important for better understanding of cancer and effective therapeutic strategies development. The available big data of somatic mutations provides us a great opportunity to investigate cancer classification using machine learning. Here, we explored the patterns of 1,760,846 somatic mutations identified from 230,255 canc...

Journal: :Hypertension 2015
F Fernandes-Rosa I Giscos-Douriez L Amar C Gomez-Sanchez T Meatchi S Boulkroun M C Zennaro

BACKGROUND Primary aldosteronism is the most common form of secondary hypertension. Somatic mutations in KCNJ5, ATP1A1, ATP2B3 and CACNA1D are found in aldosterone producing adenoma. Additionally, adrenals with aldosterone producing adenomas show cortical remodeling and frequently multiple secondary nodules. Our aim was to investigate whether different aldosterone producing nodules from the sam...

نمودار تعداد نتایج جستجو در هر سال

با کلیک روی نمودار نتایج را به سال انتشار فیلتر کنید