A high genetic diversity revealed between commercial rose cultivars by RAPD-PCR technique
Authors
Abstract:
Genetic diversity between fifteen commercial cultivars of rose were evaluated, using Ten decamer primers (A-J). All primers detected polymorphism among the cultivars. In total, 126 bands were produced, 73 of which were polymorphic. Primers E and F produced the highest, while primer H produced the lowest number of bands. The percentage of polymorphic bands ranged from 37% to 81% with an average of 63.9%. The average number of polymorphic bands produced was 7.3 per primer. Only the amplified DNA fragments ranging in size between 220 to 3000 bp were used for statistical analyses. Cluster analysis based on the presence or absence of bands was performed by Jaccard’s similarity coefficient, based on Unweighted Pair Group Method with Arithmetic Averages (UPGMA). Genetic similarity ranged between 0.12 to 0.53. The dendrogram revealed two main clusters. Each cluster was divided into subgroups. This investigation showed that genetic diversity was relatively considerable among these cultivars. Also, the results propose that RAPD marker is a useful tool for evaluation of genetic diversity and relationships amongst different rose cultivars.
similar resources
Genetic diversity among some canola cultivars as revealed by RAPD, SSR and AFLP analyses
To assess the genetic diversity among four canola cultivars (namely, Serw-3, Serw-4, Misser L-16 and Semu 249), random amplified polymorphic DNA (RAPD), simple sequence repeat polymorphism (SSR) and amplified fragment length polymorphism (AFLP) analyses were performed. The data indicated that all of the three molecular markers gave different levels of polymorphism. A total of 118, 31 and 338 ma...
full textGenetic diversity of sugarcane hybrid cultivars by RAPD markers
Genetic diversity among sugarcane hybrids (Saccharum spp) is pre-requisite for sugarcane improvement through breeding. Twelve decamer oligonucleotide random-amplified polymorphic DNA (RAPD) markers were utilized to investigate the genetic potential among 24 sugarcane cultivars. A total of 120 fragments were originated by 12 RAPD primers. An average number of fragments were obtained as 11.42 fra...
full textthe structure of genetic diversity of pistacia atlantica subsp. mutica revealed by rapd-pcr molecular markers
pistacia atlantica subsp. mutica is one of the most valuable forest tree species in iran that has been severely exploited for a long time. therefore, understanding the genetic diversity of different populations can be an important step towards the development and restoration of the habitat of this invaluable tree species. in this study, in order to study the genetic diversity, 10 populations in...
full textHigh Genetic Diversity Revealed by RAPD Markers in the Black Francolin (Francolinus francolinus, Galliformes) of Pakistan
In this study random amplified polymorphic DNA (RAPD) markers were used to infer the genetic profile of the black francolin (Francolinus francolinus, Galliformes) (N = 23) collected in five Pakistani areas (Alipur, Bait Suvai, Chakwal, Haroonabad and Rakni). A total of 269 different RAPD bands were obtained using fifteen primers. Estimates of the percentage of overall polymorphism (87.79%), Sha...
full textGenetic relationships between Lolium (Poaceae) species revealed by RAPD markers.
The genus Lolium is one of the most important groupings of temperate forage grasses, including about eight recognized species that are native to some temperate and subtropical regions of the northern hemisphere. We examined genetic relationships among 18 accessions representing all Lolium species using RAPD markers. Among 50 random primers that we screened, 13 gave reproducible amplification ba...
full textGenetic diversity of Iranian melon cultigens revealed by AFLP markers
Iran is a part of the secondary centre of origin of melons, and therefore, there is a wealth of genetic variation of these species in this country. The Amplified Fragment Length Polymorphism (AFLP) marker was applied to investigate the genetic variations among five major Iranian melon cultigens (Cucumis melo) and ‘Ananasi’ as a general well-known cultivar. Ten primer pairs were used on 90 indiv...
full textMy Resources
Journal title
volume 3 issue 4
pages 61- 66
publication date 2012-07-29
By following a journal you will be notified via email when a new issue of this journal is published.
Hosted on Doprax cloud platform doprax.com
copyright © 2015-2023