Single-Molecule Long-Read Transcriptome Dataset of Halophyte Halogeton glomeratus
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Physiological and proteomic analyses of salt stress response in the halophyte Halogeton glomeratus
Very little is known about the adaptation mechanism of Chenopodiaceae Halogeton glomeratus, a succulent annual halophyte, under saline conditions. In this study, we investigated the morphological and physiological adaptation mechanisms of seedlings exposed to different concentrations of NaCl treatment for 21 d. Our results revealed that H. glomeratus has a robust ability to tolerate salt; its o...
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Soil salinity severely threatens land use capability and crop yields worldwide. An analysis of the molecular mechanisms of salt tolerance in halophytes will contribute to the development of salt-tolerant crops. In this study, a combination of physiological characteristics and iTRAQ-based proteomic approaches was conducted to investigate the molecular mechanisms underlying the salt response of s...
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Given the importance of transcriptome analysis in various biological studies and considering thevast amount of whole transcriptome sequencing data, it seems necessary to develop analgorithm to assemble transcriptome data. In this study we propose an algorithm fortranscriptome assembly in the absence of a reference genome. First, the contiguous sequencesare generated using de Bruijn graph with d...
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Halogeton glomeratus (Bieb.) C.A. Mey (Chenopodiaceae) is an annual forb that is widely distributed in mixed desert shrub, salt desert shrub and pinyon-juniper communities of northern Utah. Halogeton glomeratus seeds gave only 78% germination in distilled water. Fusicoccin (FC) had some effects in partially alleviating innate dormancy while other chemicals had no effect. Seed germination was in...
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Halogeton (Halogeton glomeratus) is an invasive species that displaces Gardner's saltbush (Atriplex gardneri) on saline rangelands, whereas, forage kochia (Bassia prostrata) potentially can rehabilitate these ecosystems. Salinity tolerance has been hypothesized as the predominant factor affecting frequency of these species. This study compared relative salinity tolerance of these species, and t...
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