The structure of BVU2987 from Bacteroides vulgatus reveals a superfamily of bacterial periplasmic proteins with possible inhibitory function

نویسندگان

  • Debanu Das
  • Robert D. Finn
  • Dennis Carlton
  • Mitchell D. Miller
  • Polat Abdubek
  • Tamara Astakhova
  • Herbert L. Axelrod
  • Constantina Bakolitsa
  • Connie Chen
  • Hsiu-Ju Chiu
  • Michelle Chiu
  • Thomas Clayton
  • Marc C. Deller
  • Lian Duan
  • Kyle Ellrott
  • Dustin Ernst
  • Carol L. Farr
  • Julie Feuerhelm
  • Joanna C. Grant
  • Anna Grzechnik
  • Gye Won Han
  • Lukasz Jaroszewski
  • Kevin K. Jin
  • Heath E. Klock
  • Mark W. Knuth
  • Piotr Kozbial
  • S. Sri Krishna
  • Abhinav Kumar
  • David Marciano
  • Daniel McMullan
  • Andrew T. Morse
  • Edward Nigoghossian
  • Amanda Nopakun
  • Linda Okach
  • Christina Puckett
  • Ron Reyes
  • Christopher L. Rife
  • Natasha Sefcovic
  • Henry J. Tien
  • Christine B. Trame
  • Henry van den Bedem
  • Dana Weekes
  • Tiffany Wooten
  • Qingping Xu
  • Keith O. Hodgson
  • John Wooley
  • Marc-André Elsliger
  • Ashley M. Deacon
  • Adam Godzik
  • Scott A. Lesley
  • Ian A. Wilson
چکیده

Proteins that contain the DUF2874 domain constitute a new Pfam family PF11396. Members of this family have predominantly been identified in microbes found in the human gut and oral cavity. The crystal structure of one member of this family, BVU2987 from Bacteroides vulgatus, has been determined, revealing a β-lactamase inhibitor protein-like structure with a tandem repeat of domains. Sequence analysis and structural comparisons reveal that BVU2987 and other DUF2874 proteins are related to β-lactamase inhibitor protein, PepSY and SmpA_OmlA proteins and hence are likely to function as inhibitory proteins.

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عنوان ژورنال:

دوره 66  شماره 

صفحات  -

تاریخ انتشار 2010