Inference for deterministic simulation models: The Bayesian melding approach

نویسندگان

  • David Poole
  • Adrian E Raftery
چکیده

BiometricsFrench SGroup consensus probability distributions a critical survey In Bayesian Statisticseds J M Bernardo J O Berger A P Dawid and A F M Smith ppAmsterdamNorth HollandGenest CA characterization theorem for externally Bayesian groups Ann Statist Genest C McConway K J and Schervish M JCharacterization of externally Bayesianpooling operators Ann StatistGenest C and Zidek J VCombining probability distributions a critique and an annotatedbibliography with discussion Statist SciGilks W R Richardson S and Spiegelhalter D Jeds Markov Chain Monte Carlo inPractice London Chapman and HallGivens G HA Bayesian framework and importance sampling methods for synthesisingmultiple sources of evidence and uncertainty linked by a complex mechanistic model Ph Ddissertation Department of Statistics University of Washington SeattleGivens G HCon rmation of theScienti c Committee assessment of the BeringChukchi Beaufort Seas stock of bowhead whales and further sensitivity trials PaperSC AS presented to the IWC Scienti c Committee MayGivens G H and Raftery A ELocal adaptive importance sampling for multivariate densities with stong nonlinear relationships J Amer Statist AssGivens G H Raftery A E and Zeh J EBene ts of a Bayesian approach for synthesizingmultiple sources of evidence and uncertainty linked by a deterministic model Rep int WhalCommnGivens G H and Roback P JLogarithmic pooling of priors linked by a deterministicsimulation model Submitted to J Comput Graph StatistGivens G H and Thompson S EAlternative Bayesian synthesis approaches to BeringChukchi Beaufort Seas bowhead whale stock assessment Uncertainty in historic catch and hitting with xed MSYR Rep int Whal CommnGivens G H Zeh J E and Raftery A EAssessment of the Bering Chukchi Beaufort Seasstock of bowhead whales using the BALEEN II model in a Bayesian synthesis framework Repint Whal Commn Green E J McFarlane D W Valentine H T and Strawderman W EAssessing uncertainty in a stand growth model by Bayesian synthesis 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Raftery A EBayes factors J Amer Statist AssKolmogorov A NGrundbegri e der Wahrscheinlichkeitsrechnung Berlin SpringerLeslie P HOn the use of matrices in certain population mathematics Biometrika Levy J Clayton M K and Chesters GUsing an approximation of the three point GaussHermite quadrature formula for model prediction and quanti cation of uncertainty HydrogeologyJ to appearLewis S M and Raftery A EEstimating Bayes factors via posterior simulation with theLaplace Metropolis estimator J Amer Statist AssLindley D VReconciliation of discrete probability distributions In Bayesian Statisticseds J M Bernardo J O Berger A P Dawid and A F M Smith ppAmsterdamNorth Holland Madansky AExternally Bayesian groups Unpublished manuscript University of ChicagoMcCulloch R E and Rossi P EBayes factors for nonlinear hypotheses and likelihooddistributions BiometrikaO Hagan ABayes Hermite quadrature J Stat Plan and InferencePoole D and Raftery A EAssessment of the Bering Chukchi Beaufort Seas stock of bowhead whales using Bayesian and full pooling Bayesian synthesis methods Paper SC ASpresented to the IWC Scienti c Committee MayPress W H Flannery B P Teukolsky S A and Vetterling W TNumerical Recipes TheArt of Scienti c Computing Cambridge Cambridge University PressPunt A EA full description of the standard Baleen II model and some variants thereofPaper SC AWMP presented to the IWC Scienti c Committee MayPunt A E and Butterworth D SFurther remarks on the Bayesian approach for assessingthe Bering Chukchi Beaufort Seas stock of bowhead whales Rep int Whal Commn Punt A E and Butterworth D SAn assessment of the Bering Chukchi Beaufort Seas stockof bowhead whales Balaena mysticetus forusing a Bayesian approach Paper SC ASpresented to the IWC Scienti c Committee MayRaftery A E and Ban eld J DStopping the Gibbs sampler the use of morphology andother issues in spatial statistics Ann Inst Statist MathRaftery A E Givens G H and Zeh J EInference from a deterministic population dynamics model about bowhead whale Balaena mysticetus replacement yield Technical ReportnoDepartment of Statistics University of Washington SeattleRaftery A E Givens G H and Zeh J Ea Inference from a deterministic population dynamics model for bowhead whales with discussion J Amer Statist AssRaftery A E Givens G H and Zeh J Eb Rejoinder J Amer Statist AssRaftery A E and Poole DBayesian synthesis assessment methodology for bowhead whalesPaper SC AS presented to the IWC Scienti c Committee SeptemberRaftery A E Poole D and Givens G HThe Bayesian synthesis assessment methodresolving the Borel paradox and comparing the backwards and forwards variants PaperSC AS presented to the IWC Scienti c Committee June Raftery A E and Zeh J EEstimation of bowhead whale Balaena mysticetus populationsize with discussion In Bayesian Statistics in Science and Technology Case Studies eds J SHodges R E Kass C Gatsonis and N Singpurwalla ppNew York Springer VerlagRaftery A E and Zeh J EEstimating bowhead whale population size and rate of increasefrom thecensus J Amer Statist AssReilly S BObserved and maximum rates of increase in gray whales Eschrichtius robustusRep int Whal Commn Special IssueReilly S BPopulation biology and status of eastern Paci c gray whales recent developments WildlifePopulations eds D R McCullogh and R H Barrett ppLondon ElsevierRubin D BComment J Amer Statist AssRubin D BUsing the SIR Algorithm to simulate posterior distributions In BayesianStatistics eds J M Bernardo et al ppOxford Clarendon PressSchweder TComment J Amer Statist AssSchweder T and Hjort N LBayesian synthesis or likelihood synthesis what does the Borelparadox say" Paper SC AS presented to the IWC Scienti c Committee meeting DublinMaySchweder T and Hjort N LBayesian synthesis or likelihood synthesis what does Borel sparadox say" Rep int Whal CommnSchweder T and Hjort N LIndirect and direct likelihoods and their synthesis withan appendix on Minke whale dynamics Paper SC AS presented to the IWC Scienti cCommittee SeptemberSpeed TModelling CSIRO DMS NewsletterTerrell G RThe maximal smoothing principle in density estimation J Amer StatistAssWade P R and DeMaster D PA Bayesian analysis of eastern Paci c gray whale populationdynamics Paper SC AS presented to the IWC Scienti c Committee JuneWolpert R LComment J Amer Statist Ass AppendixProof of Theorem The joint distribution ofispp ggdgddgdand rewriting the model M in terms of and with as the output yieldsg M gNow consider the transformationU V whereUg M gVso thatVU g M g Vwith associated Jacobian g M g vvIt follows that the joint distribution of U and V ispU V u vp v g M g vp gv g u g M g vdg vdvdgdu g M g vNow noting that Ug M g vM we havepV jU v jpU V vp gv M g vdg vdvdgdg M g vSince Vand conditioning on Uis equivalent to conditioning on the modelthis isexactly the Bayesian synthesis post model distribution of Writing in terms of we havep gM gdgddgdg M gTo express the post model distribution in terms of we transformwhich has inverseJacobian dgd Noting the identitiesdgddgdanddgddgdwe obtain p MdgdMas in Proof of Theorem We rst consider the continuous case Forandthe resultis trivially true from the assumptions Forthe function h x x is concave onbecause h xxNoting that the ratio qq has rangeforn f qqg and applying Jensen s inequality we haveZqqdEqqqEqqq sinceEqqqZqdSoRqqdand the normalizing constant k can be found Note thatthe proof proceeds analogously in the discrete case except that the integrals are replaced by theappropriate sums Proof of Theorem We rst note thatSAiSCj and that the Cj are mutually exclusive becauseeach Ai appears in only one Cj namely Cm i Since!q Bm iand q Ai q Bm iit follows that !q Aifor each i By the mutual exclusivity of the CjXi!q AiXjXi Ai Cj!q AiXjXi Ai Cj!q Bjq AiQ CjXjXi Ai Cj!q Bjq AiPk Ak Cj q AkXj!q Bj

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تاریخ انتشار 2000