Bacterial diversity of Murlen National Park located in Indo-Burman Biodiversity hotspot region: A metagenomic approach
نویسندگان
چکیده
Paired end Illumina Mi-Seq sequencing of 16S rRNA gene amplicon was carried out to study the bacterial community in the soil of Murlen National Park located in Indo-Burman Biodiversity hotspot region. Metagenome consisted of 302,416 reads with 151.81 Mb data and G + C content of 56.48%. More than 85% sequence was having a Phred score >=Q30 and individual sequence length was 251 bp. Metagenome sequence data are available at NCBI under the Bioproject database with accession no. SRP057136. Community metagenomics revealed a total of 1802 species belonging to 29 different phyla dominated by Acidobacteria (39.45%), Proteobacteria (26.95%) and Planctomycetes (7.81%). Our data detected a wide group of bacterial community which will be useful in further isolating and characterizing the economic importance of bacteria from this region.
منابع مشابه
Diversity of Plants and Animals in Mountain Ecosystems in Tajikistan
Tajikistan is a hotspot of plant and animal species diversity and endemism andis important for the conservation of biodiversity on a global scale. The country is located ata biological crossroads. Species from Central and Northern Europe, Central Asia, theMiddle East, and North Africa mingle here with endemics found nowhere else. Therichness of Tajikistan‘s biodiversity shows up at the genetic,...
متن کاملLand use changes in an afrotropical biodiversity hotspot affect stream alpha and beta diversity
Land use changes such as deforestation and agricultural expansion strongly affect stream biodiversity, with several studies demonstrating negative impacts on stream alpha diversity. Effects of forest conversion on stream beta diversity are much harder to predict, both because empirical studies are few and because competing theories suggest opposite responses. Moreover, almost no data exist for ...
متن کاملThe effect of conservation on biodiversity indices of Gisum Forest Park and Dr. Dorostkar Warehouse in Talesh region
In order to investigate the effect of conservation on vegetation and biodiversity, two areas were studied. The main objectives of this study were to investigate the effect of conservation on biodiversity indicators. This study was conducted in two protected and unprotected areas with an area of 90 hectares. In order to harvest vegetation and biodiversity, systematic sampling method was used w...
متن کاملMetagenomic and functional analyses of the consequences of reduction of bacterial diversity on soil functions and bioremediation in diesel-contaminated microcosms.
The relationship between microbial biodiversity and soil function is an important issue in ecology, yet most studies have been performed in pristine ecosystems. Here, we assess the role of microbial diversity in ecological function and remediation strategies in diesel-contaminated soils. Soil microbial diversity was manipulated using a removal by dilution approach and microbial functions were d...
متن کاملBiodiversity of Hyphomycetes in soils of Urmia lake basin
Biodiversity of soil fungi was explored in soils of the National Park of Urmia Lake. For this purpose, 46 soil samples were collected from 5–15 cm depth and isolation was made using soil dilution plate and Warcup soil plate methods. Fungal isolates were identified based on cultural and morphological criteria. The results obtained in this study revealed that there is a rich diversity among hypho...
متن کامل