Genetic Repair for Optimization under Constraints Inspired by Arabidopsis Thaliana
نویسندگان
چکیده
It has recently been proposed that the model plant, Arabidopsis thaliana (thale cress), uses a newly discovered genetic repair system to repair errors at the genetic level. A. thaliana uses information from the grandparent’s genes as a basis for this correction – so genetic information appears to skip a generation. We apply this gene repair strategy to a combinatory optimization problem, firstly comparing the performance of parent and grandparent based repair. Subsequent experiments expand our understanding of the GeneRepair algorithm, by examining the parameters of fitness and direction involved in the generepair process. Our results point to a tentative explanation as to why A. thaliana might have evolved such an apparently complex inheritance process.
منابع مشابه
Differential Expression of Arabidopsis thaliana Acid Phosphatases in Response to Abiotic Stresses
The objective of this research is to identify Arabidopsis thaliana genes encoding acid phosphatases induced by phosphate starvation. Multiple alignments of eukaryotic acid phosphatase amino acid sequences led to the classification of these proteins into four groups including purple acid phosphatases (PAPs). Specific primers were degenerated and designed based on conserved sequences of PAPs isol...
متن کاملGene transcriptomic profile in arabidopsis thaliana mediated by radiation-induced bystander effects
Background: The in vivo radiation-induced bystander effects (RIBE) at the developmental, genetic, and epigenetic levels have been well demonstrated using model plant Arabidopsis thaliana (A. thaliana). However, the mechanisms underlying RIBE in plants are not clear, especially lacking a comprehensive knowledge about the genes and biological pathways involved in the RIBE in plants. Materials and...
متن کاملمشکلات روشهای موجود و ارائه دو روش جدید کشت هیدروپونیک گیاه آرابیدوپسیس تالیانا
Arabidopsis thaliana is a suitable model plant for genetic and molecular biology studies in higher plants. However, its hydroponic culture for biochemical and physiological studies is a challenge due to small size, capillary roots and little biomass at maturity. Several cultural systems have been suggested for Arabidopsis thaliana hydroponic culture, each having special advantages and disadvant...
متن کاملArabidopsis thaliana Inspired Genetic Restoration Strategies
A controversial genetic restoration mechanism has been proposed for the model organism Arabidopsis thaliana. This theory proposes that genetic material from non-parental ancestors is used to restore genetic information that was inadvertently corrupted during reproduction. We evaluate the effectiveness of this strategy by adapting it to an evolutionary algorithm solving two distinct benchmark op...
متن کاملYeast Two Hybrid cDNA Screening of Arabidopsis thaliana for SETH4 Protein Interaction
SETH4 coding sequence with 2013 bp is a member of gene family expressed in gametophytic tissues of Arabidopsis thaliana. This fragment was PCR amplified using Kod Hi Fi DNA polymerase enzyme. This fragment was cloned into pGBKT7 bate vector and transformed E. coli DH5? cells containing vector were selected on LB medium containing Kanamycin. Finally, pGBKT7-SETH4 bate was transformed into yeast ...
متن کامل