Heterogeneity in the Second Internal Transcribed Spacer (ITS2) of rDNA in the Genetically Distinct Metopolophium dirhodum Isofemale Lineages (Hemiptera: Aphididae)
نویسندگان
چکیده
The aim of this study was to investigate the level of evolutionary divergence among five isofemale lineages of Metopolophium dirhodum Walker (Hemiptera: Aphididae) using sequences of the Internal Transcribed Spacer (ITS) of ribosomal DNA (rDNA). These isofemalelineages were derived from parthenogenetic females, previously genetically characterized by having strong association of RAPD (Random Amplified Polymorphic DNA) molecular markers and host plant preference. Out of 25 sequences, only 17 containing ITS2 (the second spacer) were used for analysis due to their quality. Within 250 nucleotide sites originated by multiple alignments, 10.4% were variable, with the predominance of indels over substitutions. The average of nucleotide diversity (π) within isofemale lineages was similar to the diversity found among all isofemale lineages. The topology inferred by the Neighbor-Joining method showed that no evolutionary divergence inferred by ITS2 sequences among isofemale lineages typified by RAPD could be associated with host preference. The ITS2 sequence differences found within lineages and their causes are discussed.
منابع مشابه
Nucleotide sequence analysis of the Second Internal Transcribed Spacer (ITS2) in Hyalomma anatolicum anatolicum in Iran
Ticks are important acarina that infest animals. They are obligatory blood sucker arthropods which economically impact cattle industry by reducing weight gain and production. Moreover, they are important vectors of viral, bacterial, rickettsial and parasitic pathogens infecting humans and animals. In view of the importance of Hyalomma anatolicum anatolicum in pathogen transmission, including Th...
متن کاملنمونهبرداری دنبالهای شتهی Metopolophium dirhodum (Hemiptera: Aphididae) در مزارع گندم
این پژوهش به منظور تهیهی الگوی نمونهبرداری دنبالهای شتهی گندم-گل سرخ،Metopolophium dirhodum (Walker)، در مزارع گندم آبی منطقهی جلیلآباد ورامین انجام شد. برای این منظور نمونهبرداریهای هفتگی از جمعیت شته در طول دو فصل زراعی 1379 و 1380 انجام شد. در هر نمونهبرداری، تعداد 50 ساقهی گندم به طور تصادفی انتخاب و تعداد شتههای موجود شمارش شد. با دادههای بهدست آمده، الگوی توزیع فضایی جمعیت ش...
متن کاملMolecular characterization of Rhipicephalus (Boophilus) annulatus from Iran by sequences of cytochrome c oxidase subunit I (COI) and the second internal transcribed spacer (ITS2)
Background: Traditionally, morphological features of Rhipicephalus (Boophilus) annulatus from closely-related ticks have been considered for their identification and differentiation. However, it is difficult and requires expertise in order to accurately identify and differentiate engorged female ticks and some developmental stages such as larva and nymph from other similar ticks. Hence, molecul...
متن کاملMolecular Identification of Rare Clinical Mycobacteria by Application of 16S-23S Spacer Region Sequencing
Objective(s) In addition to several molecular methods and in particular 16S rDNA analysis, the application of a more discriminatory genetic marker, i.e., 16S-23S internal transcribed spacer gene sequence has had a great impact on identification and classification of mycobacteria. In the current study we aimed to apply this sequencing power to conclusive identification of some Iranian clinical ...
متن کاملIntraspeci!c variability of natural populations of Phlebotomus sergenti, the main vector of Leishmania tropica
An intraspeci!c study of Phlebotomus sergenti was performed on populations from Turkey, Syria, Israel, and Uzbekistan by four di"erent approaches: geometric morphometrics, RAPD analysis, internal transcribed spacer 2 (ITS2) sequencing (nuclear marker), and cytochrome B sequencing (mitochondrial marker). In RAPD analysis, distinct clades were formed in accordance with the geographical origin of ...
متن کامل