Mutation landscapes.

نویسندگان

  • Akira Sasaki
  • Martin A Nowak
چکیده

A traditional picture of evolutionary dynamics with constant fitness is that of genomes living in sequence space and adapting on fitness landscapes. Mutation rates are considered to be constant or externally regulated. If, however, we take into account that genomes also encode for enzymes that perform replication and error correction, then individual genomes not only have a specific replication rate (fitness), but also a specific mutation rate. This leads to the concept of a mutation landscape. We explore evolution on mutation landscapes. Localization in pure mutation landscapes is only possible under extremely restrictive conditions. Coupling of mutation landscapes and fitness landscapes leads to localization and hence adaptation and evolution. We analyse how mutation landscapes facilitate localization in fitness landscapes and vice versa. Finally, we show that for mutation landscapes, at equilibrium, with constant environment, there is not necessarily selection for the minimum mutation rate. Instead, the target of selection is an optimum distribution of mutation rates, a 'mutational quasispecies'.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Evolution on Arbitrary Fitness Landscapes when Mutation is Weak

Evolution on Arbitrary Fitness Landscapes When Mutation is Weak

متن کامل

On the Eeectiveness of Evolutionary Search in High{dimensional Nk{landscapes

| NK{landscapes ooer the ability to assess the performance of evolutionary algorithms on problems with different degrees of epistasis. In this paper, we study the performance of six algorithms in NK{landscapes with low and high dimension while keeping the amount of epistatic interactions constant. The results show that compared to genetic local search algorithms, the performance of standard gen...

متن کامل

Monotonicity of fitness landscapes and mutation rate control

A common view in evolutionary biology is that mutation rates are minimised. However, studies in combinatorial optimisation and search have shown a clear advantage of using variable mutation rates as a control parameter to optimise the performance of evolutionary algorithms. Much biological theory in this area is based on Ronald Fisher's work, who used Euclidean geometry to study the relation be...

متن کامل

Genetic Algorithms on NK-Landscapes: Effects of Selection, Drift, Mutation, and Recombination

NK-Landscapes are stochastically generated fitness functions on bit strings, parameterized with N bits and K epistatic interactions between bits. The term epistasis describes nonlinearities in fitness functions due to changes in the values of interacting bits. Empirical studies have shown that the overall performance of random bit climbers on NK-Landscapes is superior to the performance of some...

متن کامل

Predictability of Evolutionary Trajectories in Fitness Landscapes

Experimental studies on enzyme evolution show that only a small fraction of all possible mutation trajectories are accessible to evolution. However, these experiments deal with individual enzymes and explore a tiny part of the fitness landscape. We report an exhaustive analysis of fitness landscapes constructed with an off-lattice model of protein folding where fitness is equated with robustnes...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:
  • Journal of theoretical biology

دوره 224 2  شماره 

صفحات  -

تاریخ انتشار 2003