Combined functional profiling of Transcription Rate (TR) and RNA Stability (RS) using GO Biological Process
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چکیده
GO:0022613 -4.69 -1.78 1.61 0.08 0.00 0.03 q3i ribonucleoprotein complex biogenesis and assembly GO:0042254 -5.05 -1.91 1.75 0.09 0.00 0.03 q3i ribosome biogenesis GO:0000746 -11.48 -0.73 3.17 0.06 0.02 0.03 q3i conjugation GO:0000747 -11.39 -0.74 3.16 0.06 0.02 0.03 q3i conjugation with cellular fusion GO:0019953 -11.87 -0.82 3.29 0.04 0.01 0.02 q3i sexual reproduction GO:0042221 -6.65 -0.12 2.05 0.02 0.60 0.01 q3i response to chemical stimulus GO:0051704 -11.98 -0.69 3.23 0.04 0.02 0.02 q3i multi-organism process GO:0000819 -30.49 -0.87 7.10 0.02 0.03 0.02 q3i sister chromatid segregation GO:0000070 -30.23 -0.78 7.01 0.03 0.07 0.03 q3i mitotic sister chromatid segregation GO:0006260 -20.35 -0.97 4.99 0.00 0.00 0.01 q3i DNA replication GO:0006261 -25.15 -1.31 6.28 0.00 0.00 0.01 q3i DNA-dependent DNA replication GO:0019725 -9.13 -0.38 2.71 0.02 0.15 0.01 q3i cellular homeostasis GO:0042592 -8.75 -0.30 2.59 0.02 0.27 0.01 q3i homeostatic process GO:0065004 12.12 -0.49 -4.60 0.00 0.21 0.02 q4i protein-DNA complex assembly GO:0006325 8.01 -0.47 -3.09 0.00 0.03 0.01 q4i establishment and/or maintenance of chromatin architecture GO:0006323 12.63 -0.48 -4.96 0.00 0.15 0.01 q4i DNA packaging GO:0006333 12.44 -0.40 -4.84 0.00 0.23 0.01 q4i chromatin assembly or disassembly GO:0031497 12.51 -0.44 -4.84 0.00 0.20 0.01 q4i chromatin assembly GO:0006082 0.58 0.56 -0.18 0.99 0.00 1.00 yh organic acid metabolic process GO:0006519 2.41 0.43 -0.88 0.66 0.02 0.58 yh amino acid and derivative metabolic process GO:0006520 2.44 0.45 -0.87 0.65 0.02 0.58 yh amino acid metabolic process GO:0006807 2.56 0.44 -1.01 0.61 0.01 0.46 yh nitrogen compound metabolic process GO:0009308 2.41 0.41 -0.89 0.65 0.03 0.57 yh amine metabolic process GO:0019752 0.58 0.56 -0.18 0.99 0.00 1.00 yh carboxylic acid metabolic process GO:0009056 -0.54 0.34 0.15 0.99 0.02 1.00 yh catabolic process GO:0044248 -0.21 0.38 0.09 0.99 0.01 1.00 yh cellular catabolic process GO:0005975 -0.32 0.87 0.01 0.99 0.00 1.00 yh carbohydrate metabolic process GO:0005996 -0.88 0.97 0.37 0.99 0.00 1.00 yh monosaccharide metabolic process GO:0006066 -0.97 0.76 0.31 0.99 0.00 1.00 yh alcohol metabolic process GO:0044262 -0.08 0.88 -0.07 1.00 0.00 1.00 yh cellular carbohydrate metabolic process GO:0019318 -1.03 0.93 0.43 0.99 0.00 1.00 yh hexose metabolic process GO:0032787 -1.77 0.75 0.58 0.99 0.00 1.00 yh monocarboxylic acid metabolic process GO:0006006 -1.37 0.95 0.61 0.99 0.00 1.00 yh glucose metabolic process GO:0006007 0.02 1.23 0.35 1.00 0.00 1.00 yh glucose catabolic process GO:0016052 -1.20 1.09 0.55 0.99 0.00 1.00 yh carbohydrate catabolic process GO:0019320 -0.44 1.16 0.44 0.99 0.00 1.00 yh hexose catabolic process GO:0044275 -1.20 1.09 0.55 0.99 0.00 1.00 yh cellular carbohydrate catabolic process GO:0046164 -0.86 1.15 0.56 0.99 0.00 1.00 yh alcohol catabolic process GO:0046365 -0.15 1.25 0.35 0.99 0.00 1.00 yh monosaccharide catabolic process GO:0006090 -0.15 1.15 0.45 0.99 0.01 1.00 yh pyruvate metabolic process GO:0006096 -0.93 1.13 0.65 0.99 0.01 1.00 yh glycolysis GO:0009063 5.11 1.04 -1.75 0.59 0.03 0.68 yh amino acid catabolic process GO:0009310 5.53 1.09 -1.99 0.56 0.02 0.61 yh amine catabolic process GO:0044270 5.53 1.09 -1.99 0.56 0.02 0.61 yh nitrogen compound catabolic process GO:0006084 5.12 1.35 -1.65 0.46 0.00 0.52 yh acetyl-CoA metabolic process GO:0006732 0.20 0.63 -0.10 0.99 0.01 1.00 yh coenzyme metabolic process GO:0051186 0.45 0.58 -0.10 0.99 0.01 1.00 yh cofactor metabolic process GO:0006091 1.50 0.40 -0.23 0.80 0.03 1.00 yh generation of precursor metabolites and energy GO:0006113 5.76 1.41 -1.76 0.46 0.01 0.61 yh fermentation GO:0015980 2.73 0.58 -0.66 0.48 0.02 0.70 yh energy derivation by oxidation of organic compounds GO:0019751 4.35 1.38 -1.11 0.66 0.02 0.92 yh polyol metabolic process GO:0006536 3.21 1.30 -0.86 0.99 0.03 1.00 yh glutamate metabolic process GO:0009084 3.78 0.98 -1.30 0.93 0.03 0.95 yh glutamine family amino acid biosynthetic process GO:0006537 3.28 1.37 -0.87 0.99 0.03 1.00 yh glutamate biosynthetic process GO:0006766 -1.01 0.63 0.23 0.99 0.05 1.00 yh vitamin metabolic process GO:0006767 -1.01 0.63 0.23 0.99 0.05 1.00 yh water-soluble vitamin metabolic process GO:0030435 4.76 0.56 -1.98 0.43 0.02 0.27 yh sporulation GO:0005984 -70.69 1.26 12.40 0.49 0.05 0.61 yh disaccharide metabolic process GO:0008645 -1.41 1.40 0.02 0.99 0.02 1.00 yh hexose transport GO:0015749 -1.41 1.40 0.02 0.99 0.02 1.00 yh monosaccharide transport GO:0006094 -0.30 1.11 0.57 0.99 0.03 1.00 yh gluconeogenesis GO:0019319 -0.14 0.98 0.50 0.99 0.05 1.00 yh hexose biosynthetic process GO:0046165 1.85 1.14 -0.05 0.99 0.01 1.00 yh alcohol biosynthetic process GO:0046364 -0.14 0.98 0.50 0.99 0.05 1.00 yh monosaccharide biosynthetic process GO:0006739 2.55 1.46 -0.49 0.99 0.00 1.00 yh NADP metabolic process GO:0006740 3.11 1.61 -0.58 0.95 0.00 1.00 yh NADPH regeneration GO:0006769 -0.60 0.89 0.32 0.99 0.03 1.00 yh nicotinamide metabolic process GO:0019362 -0.83 0.86 0.37 0.99 0.03 1.00 yh pyridine nucleotide metabolic process GO:0006098 2.55 1.46 -0.39 0.99 0.01 1.00 yh pentose-phosphate shunt GO:0006067 3.53 1.79 -1.08 0.99 0.00 1.00 yh ethanol metabolic process GO:0009072 7.43 1.06 -3.32 0.79 0.02 0.62 yh aromatic amino acid family metabolic process
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