UTAP: User-friendly Transcriptome Analysis Pipeline
نویسندگان
چکیده
منابع مشابه
Correction: LotuS: an efficient and user-friendly OTU processing pipeline
Author details Department of Structural Biology, Vlaams Instituut voor Biotechnologie (VIB), Pleinlaan 2, Brussels 1050, Belgium. Department of Bioscience Engineering, Vrije Universiteit Brussel, Pleinlaan 2, Brussels 1050, Belgium. Structural & Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Meyerhofstrasse 1, Heidelberg 69117, Germany. Molecular Medicine Partnership ...
متن کاملLotuS: an efficient and user-friendly OTU processing pipeline
BACKGROUND 16S ribosomal DNA (rDNA) amplicon sequencing is frequently used to analyse the structure of bacterial communities from oceans to the human microbiota. However, computational power is still a major bottleneck in the analysis of continuously enlarging metagenomic data sets. Analysis is further complicated by the technical complexity of current bioinformatics tools. RESULTS Here we pr...
متن کاملMiPipeline (Microscopy Pipeline): A User Friendly Software Environment for Microscopy Image Analysis and Informatics
Recent advances in the field of optical microscopy have enabled scientists to image complex biological processes across a wide range of spatial and temporal resolutions, resulting in an exponential increase in optical microscopy data. There is now a need for a computing environment that provides accurate, high-throughput image analysis, in conjunction with data provenance, easily accessible wor...
متن کاملUser-Friendly Clustering for Atmospheric Data Analysis
Atmospheric data analysis is an important area of scientific endeavor, with both government and industrial applications. Our work focuses on clustering particle data acquired via an Aerosol Time-of-Flight Mass Spectrometer (ATOFMS), which is sold and marketed by TSI, Inc. Most papers and software tools developed by the single-particle mass spectrometry community use the ART-2a clustering algori...
متن کاملUser-Friendly Systems Instead of User-Friendly Front-Ends
S: Brief description of BROWSER, an early IBM m that allas keywrd 1 searchinK and iacludcd a thesaurus (not clear how ased). Displayed both ranked documents and index tems m 011. Excellent list 0F featares desirable in a m m and lots of good m m type quotes. FIG. 3. User screen for record display TABLE 1. Response time. Size of data set Number of queries Average number of terms per query Averag...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: BMC Bioinformatics
سال: 2019
ISSN: 1471-2105
DOI: 10.1186/s12859-019-2728-2