THREE MSA TOOLS ANALYSIS in DNA and PROTEIN DATASETS
نویسندگان
چکیده
Multiple sequence alignment (MSA) is used to align three or more sequences of DNA, RNA and protein. It prominent for constructing phylogenetic trees evolutionary relationships between with regard similarities dissimilarities. Variety multiple tools are available online, each having different methods parameters sequences. In this article MSA tools; CLUSTALW, SAGA MAFFT five datasets BALiBASE_R9, DIRMBASE, SABmark additionally constructed DNABali ProteinBali alignment. Result show that both protein DNA dataset, may be useful among tool used.
منابع مشابه
A comparison of MSA tools
Multiple sequence alignment (MSA) is essential in phylogenetic, evolutionary and functional analysis. Several MSA tools are available in the literature. Here, we use several MSA tools such as ClustalX, Align-m, T-Coffee, SAGA, ProbCons, MAFFT, MUSCLE and DIALIGN to illustrate comparative phylogenetic trees analysis for two datasets. Results show that there is no single MSA tool that consistentl...
متن کاملthe stady and analysis of rice agroclimatology in lenjan
the west of esfahan province, iran, is one of the most important agricultural areas throughout the country due to the climate variability and life-giving water of zayanderood river. rice is one of the major and economic crops in this area. the most important climatic elements in agricultural activities which should be considered include temperature, relative humidity, precipitation and wind. so...
15 صفحه اولChinese Textual Sentiment Analysis: Datasets, Resources and Tools
The rapid accumulation of data in social media (in million and billion scales) has imposed great challenges in information extraction, knowledge discovery, and data mining, and texts bearing sentiment and opinions are one of the major categories of user generated data in social media. Sentiment analysis is the main technology to quickly capture what people think from these text data, and is a r...
متن کاملa contrastive analysis of concord and head parameter in english and azerbaijani
این پایان نامه به بررسی و مقایسه دو موضوع مطابقه میان فعل و فاعل (از نظر شخص و مشار) و هسته عبارت در دو زبان انگلیسی و آذربایجانی می پردازد. اول رابطه دستوری مطابقه مورد بررسی قرار می گیرد. مطابقه به این معناست که فعل مفرد به همراه فاعل مفرد و فعل جمع به همراه فاعل جمع می آید. در انگلیسی تمام افعال، بجز فعل بودن (to be) از نظر شمار با فاعلشان فقط در سوم شخص مفرد و در زمان حال مطابقت نشان میدهند...
15 صفحه اولcohesion and cohesive devices in a contrastive analysis between ge and esp texts
the present study was an attempt to conduct a contrastive analysis between general english (ge) and english for specific purposes (esp) texts in terms of cohesion and cohesive devices. to this end, thirty texts from different esp and ge textbooks were randomly selected. then they were analyzed manually to find the frequency of cohesive devices. cohesive devices include reference, substitution, ...
15 صفحه اولذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Middle east journal of science
سال: 2021
ISSN: ['2618-6136']
DOI: https://doi.org/10.51477/mejs.983750