The Ethylation of Nucleic Acid-Bases with Triethyl Phosphate

Coarse-grained model of nucleic acid bases

Atomistic simulations of nucleic acids are prohibitively expensive and, consequently, reduced models of these compounds are of great interest in the field. In this work, we propose a physics-based coarse-grained model of nucleic-acid bases in which each base is represented by several (3-5) interaction centers. van der Waals interactions are modeled by Lennard-Jones spheres with a 12-6 potential...

Adsorption of Nucleic Acid Bases, Ribose, and Phosphate by Some Clay Minerals

Besides having a large capacity for taking up organic molecules, clay minerals can catalyze a variety of organic reactions. Derived from rock weathering, clay minerals would have been abundant in the early Earth. As such, they might be expected to play a role in chemical evolution. The interactions of clay minerals with biopolymers, including RNA, have been the subject of many investigations. T...

Electron Binding to Nucleic Acid Bases

An in-depth knowledge of an excess electron binding mechanism to DNA and RNA nucleobases is important for our understanding of radiation damage influence on the biological functions of nucleic acids, as well as for the possible use of DNA molecules as wires in molecular electronic circuits. The nature of anions created by electron attachment to individual nucleic acid bases is discussed in deta...

Electrochemical and Spectroscopic Studies of Interactions of Mn(III) Complexes with Nucleic Bases and Nucleosides

The complexes of Mn(OAc)3 and/or Mn(acac)3 with nucleic bases and nucleosides (adenine, guanine, xanthine, adenosine and guanosine) have been synthesized in nonaqueous solution. Polarographic and spectroscopic (IR and Visible) methods have been used to establish the active site(s) on the imidazole and pyrimidine rings in the nucleic bases and nucleosides for the intera...

The nucleic acid of African Horse-Sickness Virus