Technical note: Genetic groups in single-step single nucleotide polymorphism best linear unbiased predictor

نویسندگان

چکیده

Genetic groups, also called unknown or phantom parents are often used in dairy cattle genetic evaluations to account for selection that cannot be accounted by known relationships. With the advent of genomic evaluations, theory groups was extended so-called single-step BLUP (ssGBLUP). In short, can fitted ssGBLUP through regression effects, including them pedigree and computing adequate combined relationship matrix. this study, we applied Quaas Pollak transformation a system equations SNP (ssSNPBLUP), such thereafter included pedigree. The example study showed ssSNPBLUP allowed reduced memory burden computational costs comparison as covariates.

برای دانلود باید عضویت طلایی داشته باشید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Genetic evaluation using single-step genomic best linear unbiased predictor in American Angus.

Predictive ability of genomic EBV when using single-step genomic BLUP (ssGBLUP) in Angus cattle was investigated. Over 6 million records were available on birth weight (BiW) and weaning weight (WW), almost 3.4 million on postweaning gain (PWG), and over 1.3 million on calving ease (CE). Genomic information was available on, at most, 51,883 animals, which included high and low EBV accuracy anima...

متن کامل

Genetic evaluation using single-step genomic best linear unbiased predictor in American Angus1

Predictive ability of genomic EBV when using single-step genomic BLUP (ssGBLUP) in Angus cattle was investigated. Over 6 million records were available on birth weight (BiW) and weaning weight (WW), almost 3.4 million on postweaning gain (PWG), and over 1.3 million on calving ease (CE). Genomic information was available on, at most, 51,883 animals, which included high and low EBV accuracy anima...

متن کامل

Single Nucleotide Polymorphism Analysis of Protamine Genes in Infertile Men

Background Single nucleotide polymorphism (SNPs) are considered as one of the underlying causes of male infertility. Proper sperm chromatin packaging which involves replacement of histones with protamines has profound effect on male fertility. Over 20 SNPs have been reported for the protamine 1 and 2. MaterialsAndMethods The aim of this study was to evaluate the frequency of two previously repo...

متن کامل

Single-Nucleotide Polymorphism Masking

Microarrays are widely used to evaluate gene expression at the genome scale. However, all too often the importance of data analysis at the level of the individual probe is overlooked. This is a particular problem when trying to detect differences in gene expression levels among genetically unique animals, across inbred animal strains, or among genetically modified animals. Of particular concern...

متن کامل

Single-nucleotide polymorphism mapping.

Single-nucleotide polymorphism (SNP) mapping is the easiest and most reliable way to map genes in Caenorhabditis elegans. SNPs are extremely dense and usually have no associated phenotype, making them ideal markers for mapping. SNP mapping has three steps. First, recombinant mutant animals are generated over a polymorphic strain (usually CB4856) using standard genetic techniques. Second, the ge...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

ژورنال

عنوان ژورنال: Journal of Dairy Science

سال: 2021

ISSN: ['0022-0302', '1525-3198', '1529-9066']

DOI: https://doi.org/10.3168/jds.2020-19460