SpliceDB: database of canonical and non-canonical mammalian splice sites

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Analysis of canonical and non-canonical splice sites in mammalian genomes.

A set of 43 337 splice junction pairs was extracted from mammalian GenBank annotated genes. Expressed sequence tag (EST) sequences support 22 489 of them. Of these, 98.71% contain canonical dinucleotides GT and AG for donor and acceptor sites, respectively; 0.56% hold non-canonical GC-AG splice site pairs; and the remaining 0.73% occurs in a lot of small groups (with a maximum size of 0.05%). S...

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ژورنال

عنوان ژورنال: Nucleic Acids Research

سال: 2001

ISSN: 1362-4962

DOI: 10.1093/nar/29.1.255