Simulating a population genomics data set using FlowSim

Simulating SET circuits using SPICE

With single-electron tunneling (SET) technology it is possible to build electronic circuits with extreme low power properties. These SET circuits must therefore operate in the single electronics (current) regime. To simulate SET circuits in this regime, a SPICE (Simulation Program with Integrated Circuit Emphasis) model has been written In contrast to, the prescriptions in the so-called Orthodo...

Stacks: an analysis tool set for population genomics.

Massively parallel short-read sequencing technologies, coupled with powerful software platforms, are enabling investigators to analyse tens of thousands of genetic markers. This wealth of data is rapidly expanding and allowing biological questions to be addressed with unprecedented scope and precision. The sizes of the data sets are now posing significant data processing and analysis challenges...

Exploring public genomics data for population pharmacogenomics

Racial and ethnic differences in drug responses are now well studied and documented. Pharmacogenomics research seeks to unravel the genetic underpinnings of inter-individual variability with the aim of tailored-made theranostics and therapeutics. Taking into account the differential expression of pharmacogenes coding for key metabolic enzymes and transporters that affect drug pharmacokinetics a...

A Tool-Set for Simulating Altera-PLDs Using VHDL

This paper presents a tool-set for simulating Altera-PLDs 1] using VHDL 2]. It has been successfully used in a graduate course on digital design with PLDs. The tool-set supports timing simulation as well as functional simulation of designs that have been designed with the Altera MAX+plusII development tool. 1 Background Altera's PLD/FPGA design tool MAX+plusII comes with an own hardware descrip...

A minimum data set for chronic venous disease