Predicting disease genes using protein-protein interactions

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Predicting disease genes using protein-protein interactions.

BACKGROUND The responsible genes have not yet been identified for many genetically mapped disease loci. Physically interacting proteins tend to be involved in the same cellular process, and mutations in their genes may lead to similar disease phenotypes. OBJECTIVE To investigate whether protein-protein interactions can predict genes for genetically heterogeneous diseases. METHODS 72,940 pro...

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LETTER TO JMG Predicting disease genes using protein–protein interactions

Background: The responsible genes have not yet been identified for many genetically mapped disease loci. Physically interacting proteins tend to be involved in the same cellular process, and mutations in their genes may lead to similar disease phenotypes. Objective: To investigate whether protein–protein interactions can predict genes for genetically heterogeneous diseases. Methods: 72 940 prot...

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Predicting protein-protein interactions using signature products

MOTIVATION Proteome-wide prediction of protein-protein interaction is a difficult and important problem in biology. Although there have been recent advances in both experimental and computational methods for predicting protein-protein interactions, we are only beginning to see a confluence of these techniques. In this paper, we describe a very general, high-throughput method for predicting prot...

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Predicting Protein-Protein Interactions Using Relational Features

Motivation: Proteins play a fundamental role in every process within the cell. Understanding how proteins interact, and the functional units they are part of, is important to furthering our knowledge of the entire biological process. There has been a growing amount of work, both experimetal and computational, on determining the protein-protein interaction network. Recently researchers have had ...

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Predicting Protein-Protein Interactions from Protein Sequences Using Phylogenetic Profiles

In this study, a high accuracy protein-protein interaction prediction method is developed. The importance of the proposed method is that it only uses sequence information of proteins while predicting interaction. The method extracts phylogenetic profiles of proteins by using their sequence information. Combining the phylogenetic profiles of two proteins by checking existence of homologs in diff...

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ژورنال

عنوان ژورنال: Journal of Medical Genetics

سال: 2006

ISSN: 1468-6244

DOI: 10.1136/jmg.2006.041376