MYC-Mediated Ribosomal Gene Expression Sensitizes Enzalutamide-resistant Prostate Cancer Cells to EP300/CREBBP Inhibitors
نویسندگان
چکیده
Patients with advanced prostate cancer are frequently treated the antiandrogen enzalutamide. However, resistance eventually develops in virtually all patients, and various mechanisms have been associated this process. The histone acetyltransferases EP300 CREBBP involved regulation of cellular events cancer. This study investigated role EP300/CREBBP inhibitors enzalutamide-resistant led to same inhibition androgen receptor activity -sensitive cells. cells were more sensitive these viability assays. As indicated by RNA-sequencing–based pathway analysis, genes related ribosome MYC significantly altered upon inhibitor treatment. down-regulation ribosomal proteins RPL36 RPL29. High-level amplifications observed castration-resistant samples publicly available Stand Up Cancer data set. An RNA polymerase I–mediated transcription was used evaluate functional implications findings. cell lines In addition, migration rate strongly inhibited Taken together, current show that affect MYC/ribosomal protein axis may promising therapeutic implications. Prostate (PCa) is one most commonly diagnosed types cancer, especially industrialized nations. Therapy localized PCa mostly curative. For recurrent PCa, deprivation therapy via chemical or surgical castration remains standard-of-care treatment.1Barsouk A. Padala S.A. Vakiti Mohammed Saginala K. Thandra K.C. Rawla P. Barsouk Epidemiology, staging management cancer.Med Sci (Basel). 2020; 8: 28Google Scholar Although initially effective, development nearly always inevitable. case, blockade (AR) used, Enzalutamide not only inhibits ligand binding AR, but also reduces nuclear translocation as well DNA AR.2Tran C. Ouk S. Clegg N.J. Chen Y. Watson P.A. Arora V. Wongvipat J. Smith-Jones P.M. Yoo D. Kwon Wasielewska T. 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Ruau Gallipoli Fowler Crawley Papaemmanuil E. Campbell P.J. Göttgens Van Deursen Hunthly B.J.P. epigenetic regulators facilitate leukemogenesis represent targets acute myeloid leukemia.Oncogene. 2016; 35: 279-289Crossref (47) Based on involvement multiple resistance, we hypothesized domains regulate processes goal study, therefore, investigate potential enzalutamide-sensitive -resistant models characterize response. Enzalutamide-resistant inhibitors. Intriguingly, antagonized function down-regulated proteins. Consistently, found overexpressed subgroup patient samples. LNCaP (Table 1) PC3 purchased from ATCC (Gaithersburg, MD), DuCaP gift Dr. J.A. Schalken, Nijmegen, Netherlands.17van Bokhoven Varella-Garcia Korch Johannes W.U. Smith E.E. Miller H.L. Nordeen S.K. G.J. Lucia characterization human carcinoma lines.Prostate. 57: 205-225Crossref (471) 18Horoszewicz Leong S.S. Kawinski Karr J.P. Rosenthal Chu Mirand G.P. model prostatic carcinoma.Cancer 1983; 43: 1809-1818PubMed 19Lee Y.G. Korenchuk Lehr Whitney Vessela Pienta K.J. Establishment new line: DuCaP.In Vivo. 2001; 15: 157-162PubMed 20Saramäki O.R. Harjula A.E. Martikainen Vessella R.L. Tammela T.L.J. Visakorpi TMPRSS/ERG fusion identifies cancers favorable prognosis.Clin 2008; 14: 3395-3400Crossref (208) previously established xenografting followed plating metastatic tissue dura mater therapy-resistant into SCID mouse.19Lee line shows near triploid karyotype complex structural rearrangements, loss heterozygosity TP53, high wild-type gene, variant 7, which contrast cells.17van ScholarTable 1Overview Cell Lines UsedCell lineLNCaPDuCaPRef.StatusAndrogen sensitiveADT resistant17van Scholar,18Horoszewicz ScholarOrigin tissueLymph nodeDura mater18Horoszewicz Scholar,19Lee ScholarTP53WtHeterozygous loss17van ScholarTMPRSS2-ERG fusionNoYes20Saramäki ScholarART877AWt, amplification17van ScholarAR-V7 expressionNoYes17van ScholarADT, therapy. Open table tab ADT, generated chronic increasing concentrations enzalutamide, described previously.21Puhr Hoefer Eigentler Ploner Schaefer Kroon Leo Heidegger Pluijm Klocker key player survival improved therapy.Clin 24: 927-938Crossref (87) Scholar,22Hoefer Akbor Ofer Parson Critical level generation enzalutamide.Oncotarget. 7: 59781-59794Crossref (38) denoted suffix EnzaR. All cultured RPMI 1640 (PAN-Biotech, Aidenbach, Germany) 10% fetal calf serum (PAN-Biotech), 1% penicillin/streptomycin (Lonza, Basel, Switzerland), GlutaMAX (Thermo Fisher Scientific, Waltham, MA). additionally supplied 8 ?M (DuCaP EnzaR) 5 (LNCaP identity confirmed tandem repeat analysis. knockdown MYC, four different pooled siRNA constructs (ON-TARGETplus Human SMARTPool, THP, Vienna, Austria) control siControl THP) used. transfection, Lipofectamine RNAiMAX Scientific) according manufacturer’s instructions. After 3 days, lysed radioimmunoprecipitation assay buffer, blotted. A total 20 ?g per sample loaded onto 8% Tris-Acetate detection 4 12% Bis-Tris NuPAGE gels electrophoretic separation. Gels then blotted 0.2 ?m Amersham Protran Nitrocellulose membrane (Sigma, St. Louis, MO). Membranes stained using Revert 700 Total Stain (LI-COR Biosciences, Lincoln, NE) quantify protein. incubated Starting Blocking Buffer 1 hour room temperature before overnight incubation primary antibody 4°C. washing Tris-buffered saline 0.1% Tween-20 (hereafter termed TBST), membranes IRDye Goat anti-Rabbit/Mouse IgG Secondary Antibody Biosciences) 45 minutes. Odyssey imaging System scan after TBST Image Studio software (version 5.2, LI-COR amounts. blots probed repeatedly. antibodies dilutions: (7389S, Signaling Technology, Danvers, MA; 1:2000), (ab10485, Abcam, Cambridge, UK; 1:1000), FKBP5/FKBP51(A301-430A, Bethyl, Montgomery, TX; alpha tubulin (sc-5286, Santa Cruz Laboratories, Dallas, (D84C12, Signaling; RPL29 (AP20452c-ev, ABcepta, San Diego, CA; 1:500), (ELA-E-AB-32803 60, Elabscience Biotechnology, Houston, glyceraldehyde-3-phosphate dehydrogenase (ABS16, Millipore, Burlington, 1:5000). Parental seeded 384-well plate (Corning, Corning, NY) triplicate 200 2000 well, respectively, C646 (Sigma), I-CBP112 (Tocris, Bristol, UK), CPI637 (MedChem Express, Monmouth Junction, NJ), CX-5461 Express), solvent dimethyl sulfoxide (Sigma). RealTime-Glo MT (Promega, Madison, WI) manufacturer. Cytation5 (BioTek, Winooski, VT) reader equipped carbon dioxide chamber heated 37°C luminescence over 72 hours. Dose–response curves GraphPad Prism (GraphPad Software Inc., La Jolla, CA) 50% inhibitory compared sum-of-square-F-test. Quantitative real-time PCR performed described.23Puhr Neuwirt Susani Nemeth Kenner Down-regulation suppressor cytokine signaling-3 causes death extrinsic intrinsic apoptosis pathways.Cancer 69: 7375-7384Crossref (75) isolated EXTRACTME Isolation kit (Blirt, Zgierz, Poland) LUNAScript (New England Biolabs, Ipswich, MA) transcribe 250 ng cDNA. quantitative PCR, cDNA mixed LUNA Universal Probe RT-qPCR Master Mix Biolabs) assessed duplicate 7500 Fast Real-Time (Applied Biosystems, Foster City, CA). Geometric mean CT values reference HMBS, HPRT1, TBP normalization. FKBP5, PSA, TMPRSS2 2).Table 2Primer Pairs Used RT-qPCRGenesGeneSequence/Catalog no.ManufacturerHousekeeping genesTBPForward: 5?-CACGAACCACGGCACTGATT-3?Microsynth AGReverse: 5?-TTTTCTTGCTGCCAGTCTGGAC-3?Probe: 5?- TCTTCACTCTTGGCTCCTGTGCACA-3?-TAMRAHPRTForward: GCTTTCCTTGGTCAGGCAGTA-3?Reverse: 5?-GTCTGGCTTATATCCAACACTTCGT-3?Probe: 5?-CAAGGTCGCAAGCTTGCTGGTGAAAAGGA-3?-TAMRAHMBSTaqMan Gene Expression Assay: Hs00609297_m1Thermo ScientificTarget genesFKBP5TaqMan Hs01561006_m1Thermo ScientificTMPRSS2TaqMan Hs01120965_m1Thermo ScientificPSAForward: 5?-GTCTGCGGCGGTGTTCTG-3?Microsynth 5?-TGCCGACCCAGCAAGATC-3?Probe: 5?-CACAGCTGCCCACTGCATCAGGA-3?-TAMRART-qPCR, PCR. RT-qPCR, 96-well plates 2 × 104 respectively. Cells transfected x-tremeGENE HP (Roche, Switzerland) 50 pGL4.53 (Promega) encoding firefly luciferase under constitutive promoter (PGK) normalization pGL4.70 NanoLuc TATA-box preceded elements. R1881. measured 24 hours Nano-Glo Dual-Luciferase Reporter Assay microplate (BioTek). 6-well 105 6 well. day, 10 C646, I-CBP112, equivalent triplicate. extracted (Blirt) Quality Bioanalyzer, poly(A) enrichment, synthesis, library preparation, Illumina sequencing, trimming Microsynth AG (Balgach, Switzerland). One replicate removed quality Alignment, counting tables, differential online platform usegalaxy.org (last accessed June 2020).24Afgan Baker Batut den Beek Bouvier Cech Chilton Clements Coraor Grüning B.A. Guerler Hillman-Jackson Hiltermann Jalili Rasche Soranzo Goecks Taylor Nekrutenko Blankenberg Galaxy accessible, reproducible collaborative biomedical analyses: 2018 update.Nucleic Acids 46: W537-W544Crossref (1507) Sequences aligned HG19 HiSat2 version 2.1.0.25Kim Langmead Salzberg S.L. HISAT: fast spliced aligner low memory requirements.Nat Meth. 12: 357-360Crossref (8007) HTSeq 0.61 generate count tables.26Anders Pyl P.T. Huber HTSeq—a Python framework work high-throughput sequencing data.Bioinformatics. 31: 166-169Crossref (9954) Differential DESeq2 2.11.27Love M.I. Anders Moderated estimation fold change dispersion RNA-seq DESeq2.Genome Biol. 2014; 550Crossref (27547) ClusterProfiler 3.16.0 screen up- overrepresented Ontology 3.11.4 annotations Cellular Component.28Ashburner Ball Blake Botstein Butler Cherry Davis A.P. Dolinski Dwight Eppig J.T. Harris M.A. Hill D.P. Issel-Tarver Kasarskis Lewis Matese J.C. Richardson J.E. Ringwald Rubin G.M. Sherlock ontology: tool unification biology. Consortium.Nat Genet. 25-29Crossref (25795) Scholar,29Yu L.G. Han He Q.Y. clusterProfiler: an R package comparing biological themes among clusters.OMICS. 284-287Crossref (9465) Up- signatures quantified GSEA (Broad Institute, MA).30Subramanian Tamayo Mootha V.K. Mukherjee Ebert B.L. Gillette Paulovich Pomeroy Golub T.R. Lander E.S. Mesirov set enrichment analysis: knowledge-based approach interpreting genome-wide profiles.Proc Natl Acad U S 2005; 102: 15545-15550Crossref (24108) tools standard settings. Data deposited Omnibus (www.ncbi.nlm.nih.gov/geo/GSE163240; accession number GSE163240). mRNA (FPKM, polyA) copy aberration To downloaded cBioPortal (dataset February 13, 2020). We did observe any difference created July 2020.31Abida Cyrta Heller Prandi Amenia Coleman et al.Genomic correlates clinical outcome cancer.Proc 2019; 116: 11428-11436Crossref (422) calculated Set Variation Analysis 1.36.2 statistical 4.0.1 (R Foundation Statistical Computing, Austria). r score P value Pearson correlation. heatmaps ComplexHeatmap 2.4.3). EnzaR described. harvested re-treated serum-free medium 24-well FluoroBlok inserts pore size (Corning). Growth chemoattractant lower chamber. 48 hours, ?mol/L Calcein AM (Sigma) dissolved Hanks’ Balanced Salt Solution (Lonza) bovine albumin Staining solution added. staining (BioTek) representative images taken JuLI smart fluorescent analyzer (Science Services, Munich, Germany). percentage migrated relative parallel without account reduced CX-5461–treated wells. comparison independent replicates Western blot, reporter assay, Boyden-chamber normalized average signal intensity. One-way two-way variance Dunnett’s Tukey’s comparisons test unless stated otherwise. Significant noted figures ?P < 0.05, **P 0.01, ***P 0.001. setting (henceforth EnzaR, respectively) clearly detectable, no significant differences between (Figure 1A). Therefore, growth effect compounds directed against dose–response proliferation assays tested. domain, BD.32Bowers Yan Orry Holbert Crump N.T. Hazzalin Lisczak Yuan Saldanha Abagyarn Sun Marmorstein Mahadevan L.C. Virtual screening p300/CBP acetyltransferase: identification selective small molecule inhibitor.Chem 17: 471-482Abstract (457) Scholar,33Picaud Fedorov O. Thanasopoulou Leonards Jones Meier al.Generation leukemia therapy.Cancer 75: 5106-5119Crossref (157) Specific due sequence similarities. Viability inhibitors, determined 1B). Interestingly, both their nonresistant parental counterparts 1, C D). exhibited greater sensitivity, Because important co-factors, whether contributed higher sensitivity might effects
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ژورنال
عنوان ژورنال: American Journal of Pathology
سال: 2021
ISSN: ['1525-2191', '0002-9440']
DOI: https://doi.org/10.1016/j.ajpath.2021.02.017