KEA: kinase enrichment analysis

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KEA: kinase enrichment analysis

MOTIVATION Multivariate experiments applied to mammalian cells often produce lists of proteins/genes altered under treatment versus control conditions. Such lists can be projected onto prior knowledge of kinase-substrate interactions to infer the list of kinases associated with a specific protein list. By computing how the proportion of kinases, associated with a specific list of proteins/genes...

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Kea: Expression-level Sentiment Analysis from Twitter Data

This paper describes an expression-level sentiment detection system that participated in the subtask A of SemEval-2013 Task 2: Sentiment Analysis in Twitter. Our system uses a supervised approach to learn the features from the training data to classify expressions in new tweets as positive, negative or neutral. The proposed approach helps to understand the relevant features that contribute most...

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Security Analysis of KEA Authenticated Key Exchange Protocol

KEA is a Diffie-Hellman based key-exchange protocol developed by NSA which provides mutual authentication for the parties. It became publicly available in 1998 and since then it was neither attacked nor proved to be secure. We analyze the security of KEA and find that the original protocol is susceptible to a class of attacks. On the positive side, we present a simple modification of the protoc...

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Kea: Sentiment Analysis of Phrases Within Short Texts

Sentiment Analysis has become an increasingly important research topic. This paper describes our approach to building a system for the Sentiment Analysis in Twitter task of the SemEval-2014 evaluation. The goal is to classify a phrase within a short piece of text as positive, negative or neutral. In the evaluation, classifiers trained on Twitter data are tested on data from other domains such a...

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RIP-chip enrichment analysis

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ژورنال

عنوان ژورنال: Bioinformatics

سال: 2009

ISSN: 1367-4803,1460-2059

DOI: 10.1093/bioinformatics/btp026