Introducing bioinformatics

Bioinformatics III: Structural Bioinformatics and Genome Analysis

Evolution, Bioinformatics and Evolutionary Bioinformatics Online

E volutionary Bioinformatics Online enjoyed a busy and productive fi rst year in 2005, capped off by being accepted by the Literature Selection and Technical Review Committee at the National Library of Medicine in the US, for inclusion in PubMed Central. This means that EBO will be indexed online in this internationally preeminent archive. A brief history. Evolutionary Bioinformatics Online was...

An inquiry into protein structure and genetic disease: introducing undergraduates to bioinformatics in a large introductory course.

This inquiry-based lab is designed around genetic diseases with a focus on protein structure and function. To allow students to work on their own investigatory projects, 10 projects on 10 different proteins were developed. Students are grouped in sections of 20 and work in pairs on each of the projects. To begin their investigation, students are given a cDNA sequence that translates into a huma...

Bioinformatics Program

1) Venkata Alluri and Venkatesh Rajamanickam Sequence and Structural Analysis of Bm86 Cattle Tick Proteins 2) Kyle Boone Cryo-EM Image Alignment Based on Nonuniform Fast Fourier Transform 3) Ranjan Das Global Gene Expression Profiling of Plasmodium Falciparum In Response to the AntiMalarial Drug Pyronaridine 4) Karla Garcia Fractionation of Copper in Aquatic Foodweb 5) Sankara Garimella Influen...

Introducing TRIM

We present TRIM, an abstract machine capable of executing a subset of the algebraic speci cation language OBJ3. A speci cally designed compiler translates the order sorted conditional equations of an OBJ3 speci cation into TRIM code. The fact that TRIM supports order sorted term rewriting natively di erentiates it from many other abstract term rewriting machines. To obtain more e cient abstract...