Interchromosomal Homology Searches Drive Directional ALT Telomere Movement and Synapsis

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Interchromosomal Homology Searches Drive Directional ALT Telomere Movement and Synapsis

Telomere length maintenance is a requisite feature of cellular immortalization and a hallmark of human cancer. While most human cancers express telomerase activity, ∼10%-15% employ a recombination-dependent telomere maintenance pathway known as alternative lengthening of telomeres (ALT) that is characterized by multitelomere clusters and associated promyelocytic leukemia protein bodies. Here, w...

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PubServer: literature searches by homology

PubServer, available at http://pubserver.burnham.org/, is a tool to automatically collect, filter and analyze publications associated with groups of homologous proteins. Protein entries in databases such as Entrez Protein database at NCBI contain information about publications associated with a given protein. The scope of these publications varies a lot: they include studies focused on biochemi...

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Telomere clustering is required for the homologous recombination events that maintain chromosome ends in cells relying on alternative lengthening of telomeres (ALT). New data demonstrate that damage signaling at telomeres, a likely step in activating maintenance mechanisms, induces directional movement and synapsis driven by the machinery responsible for recombination in meiosis.

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While many different aspects of retrieval algorithms (e.g., BLAST) have been studied in depth, the method for determining the retrieval threshold has not enjoyed the same attention. Furthermore, with genetic databases growing rapidly, the challenges of multiple testing are escalating. In order to improve search sensitivity, we propose the use of the false discovery rate (FDR) as the method to c...

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ژورنال

عنوان ژورنال: Cell

سال: 2014

ISSN: 0092-8674

DOI: 10.1016/j.cell.2014.08.030