Improved hybrid de novo genome assembly of domesticated apple (Malus x domestica)
نویسندگان
چکیده
منابع مشابه
Improved hybrid de novo genome assembly of domesticated apple (Malus x domestica)
BACKGROUND Domesticated apple (Malus × domestica Borkh) is a popular temperate fruit with high nutrient levels and diverse flavors. In 2012, global apple production accounted for at least one tenth of all harvested fruits. A high-quality apple genome assembly is crucial for the selection and breeding of new cultivars. Currently, a single reference genome is available for apple, assembled from 1...
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Given the importance of transcriptome analysis in various biological studies and considering thevast amount of whole transcriptome sequencing data, it seems necessary to develop analgorithm to assemble transcriptome data. In this study we propose an algorithm fortranscriptome assembly in the absence of a reference genome. First, the contiguous sequencesare generated using de Bruijn graph with d...
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ژورنال
عنوان ژورنال: GigaScience
سال: 2016
ISSN: 2047-217X
DOI: 10.1186/s13742-016-0139-0