<i>In vivo</i> stabilization of endogenous chloroplast RNAs by customized artificial pentatricopeptide repeat proteins
نویسندگان
چکیده
Abstract Pentatricopeptide repeat (PPR) proteins are helical repeat-proteins that bind RNA in a modular fashion with sequence-specificity can be manipulated by the use of an amino acid code. As such, PPR repeats promising scaffolds for design binding synthetic biology applications. However, vivo functional capabilities artificial built from consensus motifs just starting to explored. Here, we report functions protein, dPPRrbcL, made were designed sequence near 5? end rbcL transcripts Arabidopsis chloroplasts. We used complementation assay demonstrate this protein bound its intended target specificity and it substituted natural stabilizing processed mRNA. targeted second analogous petL UTR, where native PGR3, albeit inefficiently. These results showed engineered functionally mimic class serve as physical barriers against exoribonucleases.
منابع مشابه
Chloroplast RNA editing by pentatricopeptide repeat proteins.
Pentatricopeptide repeat (PPR) proteins function in multiple processes in mRNA maturation in plastids and mitochondria (reviewed in Schmitz-Linneweber and Small, 2008). RNA maturation in chloroplasts is complex, and PPR proteins act in cisand trans-splicing, translation, RNA cleavage, RNA stabilization, and RNA editing. This large protein family, with 450 members in Arabidopsis, is characterize...
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Chloroplast gene expression is mainly regulated at the post-transcriptional level by numerous nuclear-encoded RNA-binding protein factors. In the present study, we focus on two RNA-binding proteins: cpRNP (chloroplast ribonucleoprotein) and PPR (pentatricopeptide repeat) protein. These are suggested to be major contributors to chloroplast RNA metabolism. Tobacco cpRNPs are composed of five diff...
متن کاملPentatricopeptide repeat proteins
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متن کاملConserved domain structure of pentatricopeptide repeat proteins involved in chloroplast RNA editing.
The pentatricopeptide repeat (PPR) proteins form one of the largest families in higher plants and are believed to be involved in the posttranscriptional processes of gene expression in plant organelles. It has been shown by using a genetic approach focusing on NAD(P)H dehydrogenase (NDH) activity that a PPR protein CRR4 is essential for a specific RNA editing event in chloroplasts. Here, we dis...
متن کاملHCF152, an Arabidopsis RNA binding pentatricopeptide repeat protein involved in the processing of chloroplast psbB-psbT-psbH-petB-petD RNAs.
The psbB-psbT-psbH-petB-petD operon of higher plant chloroplasts is a heterogeneously composed transcriptional unit that undergoes complex RNA processing events until the mature oligocistronic RNAs are formed. To identify the nucleus-encoded factors required for the processing and expression of psbB-psbT-psbH-petB-petD transcripts, we performed mutational analysis using Arabidopsis. The allelic...
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ژورنال
عنوان ژورنال: Nucleic Acids Research
سال: 2021
ISSN: ['1362-4962', '1362-4954', '0305-1048']
DOI: https://doi.org/10.1093/nar/gkab390