graphite - a Bioconductor package to convert pathway topology to gene network
نویسندگان
چکیده
منابع مشابه
TAC: A Topology-Aware Chord-based Peer-to-Peer Network
Among structured Peer-to-Peer systems, Chord has a general popularity due to its salient features like simplicity, high scalability, small path length with respect to network size, and flexibility on node join and departure. However, Chord doesn’t take into account the topology of underlying physical network when a new node is being added to the system, thus resulting in high routing late...
متن کاملBioconductor: Annotation Package Overview
We will briefly describe the second and third of these different aspects and then for the remainder of this vignette concentrate on the first category. The other three have their own vignettes. There are two different, but complementary strategies for accessing metadata. One is to use highly curated data that have been assembled from many different sources and a second is to rely on on-line sou...
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SWATH-MS is an acquisition and analysis technique of targeted proteomics that enables measuring several thousand proteins with high reproducibility and accuracy across many samples. OpenSWATH is popular open-source software for peptide identification and quantification from SWATH-MS data. For downstream statistical and quantitative analysis there exist different tools such as MSstats, mapDIA an...
متن کاملBioconductor: Annotation Package Overview
We will briefly describe the second and third of these different aspects and then for the remainder of this vignette concentrate on the first category. The other three have their own vignettes. There are two different, but complementary strategies for accessing metadata. One is to use highly curated data that have been assembled from many different sources and a second is to rely on on-line sou...
متن کاملBioconductor: Annotation Package Overview
We will briefly describe the second and third of these different aspects and then for the remainder of this vignette concentrate on the first category. The other three have their own vignettes. There are two different, but complementary strategies for accessing metadata. One is to use highly curated data that have been assembled from many different sources and a second is to rely on on-line sou...
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ژورنال
عنوان ژورنال: BMC Bioinformatics
سال: 2012
ISSN: 1471-2105
DOI: 10.1186/1471-2105-13-20