Genes and homology

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Genes and homology

What is your favourite/least favourite conference? I don't have a favourite conference series, and I can only guess what my least favourite would be. The most exciting single conference that I ever attended took place in Soviet Armenia in 1971. It was entitled “Communication with Extraterrestrial Intelligence”. What made it memorable was the mix of bright and lively participants who covered eve...

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Homology search for genes

MOTIVATION Life science researchers often require an exhaustive list of protein coding genes similar to a given query gene. To find such genes, homology search tools, such as BLAST or PatternHunter, return a set of high-scoring pairs (HSPs). These HSPs then need to be correlated with existing sequence annotations, or assembled manually into putative gene structures. This process is error-prone ...

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Homology Search for Genes Using Biased HMMs

Motivation: Life science researchers often require an exhaustive list of protein coding genes similar to a given query gene. To find such genes, homology search tools, such as BLAST or PatternHunter, return a set of high-scoring pairs (HSPs). These HSPs then need to be correlated with existing sequence annotations, or assembled manually into putative gene structures. This process is error-prone...

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New human and mouse microRNA genes found by homology search.

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Identifying cycling genes by combining sequence homology and expression data

MOTIVATION The expression of genes during the cell division process has now been studied in many different species. An important goal of these studies is to identify the set of cycling genes. To date, this was done independently for each of the species studied. Due to noise and other data analysis problems, accurately deriving a set of cycling genes from expression data is a hard problem. This ...

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ژورنال

عنوان ژورنال: Current Biology

سال: 2004

ISSN: 0960-9822

DOI: 10.1016/j.cub.2004.04.016