Gene clustering and copy number variation in alkaloid metabolic pathways of opium poppy
نویسندگان
چکیده
منابع مشابه
Tyrosine aminotransferase contributes to benzylisoquinoline alkaloid biosynthesis in opium poppy.
Tyrosine aminotransferase (TyrAT) catalyzes the transamination of L-Tyr and α-ketoglutarate, yielding 4-hydroxyphenylpyruvic acid and L-glutamate. The decarboxylation product of 4-hydroxyphenylpyruvic acid, 4-hydroxyphenylacetaldehyde, is a precursor to a large and diverse group of natural products known collectively as benzylisoquinoline alkaloids (BIAs). We have isolated and characterized a T...
متن کاملBIRC5 Genomic Copy Number Variation in Early-Onset Breast Cancer
Background: Baculoviral inhibitor of apoptosis repeat-containing 5 (BIRC5) gene is an inhibitor of apoptosis that expresses in human embryonic tissues but it is absent in most healthy adult tissues. The copy number of BIRC5 has been indicated to be highly increased in tumor tissues; however, its association with the age of onset in breast cancer is not well understood. Methods: Forty tumor tiss...
متن کاملSparse Representation Based Clustering for Integrated Analysis of Gene Copy Number Variation and Gene Expression Date
Integrated analysis of multiple types of genomic data has received increasing attention in recently years, due to the rapid development of new genetic techniques and the strong demand for the improvement of the reliability of these techniques. In this work, we proposed a sparse representation based clustering (SRC) method for joint analysis of gene expression and copy number data with the purpo...
متن کاملAFLP Analysis of Opium Poppy
There are several different DNA analysis procedures that have been used to identify and characterize plant Amplified restriction fragment length polymorphic (AFLP) DNA cultivars to determine genetic diversity. Each procedure analysis was performed on leaf samples of 40 accessions of opium poppy (Papaver somniferum L.) and two other control genera (Pahas it own requirements, sensitivity, and rel...
متن کاملSystematic silencing of benzylisoquinoline alkaloid biosynthetic genes reveals the major route to papaverine in opium poppy.
Papaverine, a major benzylisoquinoline alkaloid in opium poppy (Papaver somniferum), is used as a vasodilator and antispasmodic. Conversion of the initial intermediate (S)-norcoclaurine to papaverine involves 3'-hydroxylation, four O-methylations and dehydrogenation. However, our understanding of papaverine biosynthesis remains controversial more than a century after an initial scheme was propo...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Nature Communications
سال: 2020
ISSN: 2041-1723
DOI: 10.1038/s41467-020-15040-2