Functional characterization of Tn1331 gene cassettes

Functional characterization of Tn1331 gene cassettes.

OBJECTIVES The transposon Tn1331 possesses a region including three antibiotic resistance genes with the structure aac(6')-Ib-attC-aadA1-attI1*-bla(OXA-9)-attC, which potentially includes four gene cassettes. Experimental data on the mobility of fusion cassettes as well as those on mobility of cassettes in a genetic environment such as Tn1331, which lacks an integrase gene, are limited. Therefo...

Functional gene cassettes in development.

It has been noted in recent years that groups ofgenes are often used at multiple stages and multiple places of development. Comparison of the functions of each group of genes in different developmental context gave rise to the notion of "functional gene cassettes." These groups of genes can often be viewed as sets of tools; each group is suited to carry out a certain operation and may serve sim...

Functional Characterization and Gene

Integrons and gene cassettes in the enterobacteriaceae.

Integrons were detected in 59 of 120 (49%) urinary isolates of Enterobacteriaceae by PCR using degenerate primers targeted to conserved regions of class 1, 2, and 3 integrase genes. PCR sequencing analysis of the cassette arrays revealed a predominance of cassettes that confer resistance to the aminoglycosides and trimethoprim.

Excisable cassettes: new tools for functional analysis of Streptomyces genomes.

The functional analysis of microbial genomes often requires gene inactivation. We constructed a set of cassettes consisting of single antibiotic resistance genes flanked by the attL and attR sites resulting from site-specific integration of the Streptomyces pSAM2 element. These cassettes can easily be used to inactivate genes by in-frame deletion in Streptomyces by a three-step strategy. In the...