DNA barcoding of plants: Selection of core markers for taxonomic groups
نویسندگان
چکیده
منابع مشابه
Unbiased probabilistic taxonomic classification for DNA barcoding
MOTIVATION When targeted to a barcoding region, high-throughput sequencing can be used to identify species or operational taxonomical units from environmental samples, and thus to study the diversity and structure of species communities. Although there are many methods which provide confidence scores for assigning taxonomic affiliations, it is not straightforward to translate these values to un...
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BACKGROUND At present, plant molecular systematics and DNA barcoding techniques rely heavily on the use of chloroplast gene sequences. Because of the relatively low evolutionary rates of chloroplast genes, there are very few choices suitable for molecular studies on angiosperms at low taxonomic levels, and for DNA barcoding of species. METHODOLOGY/PRINCIPAL FINDINGS We scanned the entire chlo...
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DNA-BAR is a software package for selecting DNA probes (henceforth referred to as distinguishers) that can be used in genomic-based identification of microorganisms. Given the genomic sequences of the microorganisms, DNA-BAR finds a near-minimum number of distinguishers yielding a distinct hybridization pattern for each microorganism. Selected distinguishers satisfy user specified bounds on len...
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Department of Biosciences, P.O. Box 65, FI-00014, University of Helsinki, Finland. 8 2 State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy 9 of Sciences, 32 Jiaochang East Road, Kunming, Yunnan 650223, China 10 School of Biological Sciences, University of East Anglia, Norwich Research Park, Norwich, Norfolk, NR47TJ 11 UK 12 Groningen Institute ...
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ژورنال
عنوان ژورنال: Plant Science Today
سال: 2017
ISSN: 2348-1900
DOI: 10.14719/pst.2018.5.1.356