De Novo Assembly and Characterization of Fruit Transcriptome in Black Pepper (Piper nigrum)

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De Novo Assembly and Characterization of Fruit Transcriptome in Black Pepper (Piper nigrum)

Black pepper is one of the most popular and oldest spices in the world and valued for its pungent constituent alkaloids. Pinerine is the main bioactive compound in pepper alkaloids, which perform unique physiological functions. However, the mechanisms of piperine synthesis are poorly understood. This study is the first to describe the fruit transcriptome of black pepper by sequencing on Illumin...

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Correction: De Novo Assembly and Characterization of Fruit Transcriptome in Black Pepper (Piper nigrum)

There are errors in the Funding section. The correct funding information is as follows: This project was funded by the Ministry of Agriculture of the People’s Republic of China (2015NWB046) and the Program for the Top Young Talents in Chinese Academy of Tropical Agricultural Sciences (1630052015049). The funders had no role in study design, data collection and analysis, decision to publish, or ...

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Clustering of Short Read Sequences for de novo Transcriptome Assembly

Given the importance of transcriptome analysis in various biological studies and considering thevast amount of whole transcriptome sequencing data, it seems necessary to develop analgorithm to assemble transcriptome data. In this study we propose an algorithm fortranscriptome assembly in the absence of a reference genome. First, the contiguous sequencesare generated using de Bruijn graph with d...

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Biological role of Piper nigrum L. (Black pepper): A review

Piper nigrum is famous as the spices king due to its pungent quality[1]. Piper nigrum (P.nigrum) L. is a member of family Piperaceae[2-4]. The genus piper has more than 1000 species but the most well known species are P.nigrum, P.longum and P.betle; 51 cultivars of p. nigrum have been reported from the tropical and subtropical regions of India [5]. P.nigrum fruits are also used to produce white...

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Black Pepper (Piper nigrum) Fruit Extract Activity against Some Pathogenic Bacterial Strains by Disc Diffusion Method

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ژورنال

عنوان ژورنال: PLOS ONE

سال: 2015

ISSN: 1932-6203

DOI: 10.1371/journal.pone.0129822