D-MATRIX: A web tool for constructing weight matrix of conserved DNA motifs
نویسندگان
چکیده
منابع مشابه
D-MATRIX: A web tool for constructing weight matrix of conserved DNA motifs
UNLABELLED Despite considerable efforts to date, DNA motif prediction in whole genome remains a challenge for researchers. Currently the genome wide motif prediction tools required either direct pattern sequence (for single motif) or weight matrix (for multiple motifs). Although there are known motif pattern databases and tools for genome level prediction but no tool for weight matrix construct...
متن کاملDNA-MATRIX a tool for DNA motif discovery and weight matrix construction
In computational molecular biology, gene regulatory binding sites prediction in whole genome remains a challenge for the researchers. Now a days, the genome wide regulatory binding site prediction tools required either direct pattern sequence or weight matrix. Although there are known transcription factor binding sites databases available for genome wide prediction but no tool is available whic...
متن کاملConstructing and Validating a Q-Matrix for Cognitive Diagnostic Analysis of a Reading Comprehension Test Battery
Of paramount importance in the study of cognitive diagnostic assessment (CDA) is the absence of tests developed for small-scale diagnostic purposes. Currently, much of the research carried out has been mainly on large-scale tests, e.g., TOEFL, MELAB, IELTS, etc. Even so, formative language assessment with a focus on informing instruction and engaging in identification of student’s strengths and...
متن کاملModeling social influence through network autocorrelation: constructing the weight matrix
Many physical and social phenomena are embedded within networks of interdependencies, the so-called ‘context’ of these phenomena. In network analysis, this type of process is typically modeled as a network autocorrelation model. Parameter estimates and inferences based on autocorrelation models, hinge upon the chosen specification of weight matrix W, the elements of which represent the influenc...
متن کاملCREDO: a web-based tool for computational detection of conserved sequence motifs in noncoding sequences
SUMMARY CREDO is a user-friendly, web-based tool that integrates the analysis and results of different algorithms widely used for the computational detection of conserved sequence motifs in noncoding sequences. It enables easy comparison of the individual results. CREDO offers intuitive interfaces for easy and rapid configuration of the applied algorithms and convenient views on the results in ...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Bioinformation
سال: 2009
ISSN: 0973-8894,0973-2063
DOI: 10.6026/97320630003415