CSIG-07. GAIN-OF-FUNCTION MUTANT P53 REGULATES LONG-NONCODING RNAS IN GLIOBLASTOMA
نویسندگان
چکیده
Abstract P53 is frequently mutated in most human cancers, including glioblastoma (GBM). Many p53 mutants acquire gain-of-function oncogenic effects through only partially understood mechanisms. To investigate the role of mutant (MUT-p53) GBM, we performed ChIP-seq wildtype (WT-p53) and MUT-p53 GBM cell lines. Among 2834 unique peaks reads cells, found 242 long non-coding RNAs (lncRNAs) with up to 145 fold enrichment relative WT-p53. LncRNAs regulate many molecular cellular functions, gene expression, proliferation, death, cancer stem renewal differentiation. We selected lncRNAs SOX21-AS1 LINC00643 highly enriched binding by investigated their expressions functions pathway. ChIP confirmation promoters these lncRNAs. that are deregulated correlated patient survival TCGA database. LncRNAs, knocked down siRNA, significant death induced si-SOX21-AS1, but not si-LINC00643. Overexpression cells led inhibition migration, invasion vivo xenograft growth. mediated MUT-p53. Co-expression its mouse homologous a RCAS transgenic model reduced tumor growth improved animal survival. elucidate mechanisms action lncRNA, Chromatin Isolation RNA purification high-throughput sequencing (CHIRP-seq) identify targets. binds HIF1a 5’ promoter/enhancer region. at hypoxia condition mRNA protein expression. Our study shows for first time regulates subset mediate GBM.
منابع مشابه
Mutant p53 gain-of-function in cancer.
In its wild-type form, p53 is a major tumor suppressor whose function is critical for protection against cancer. Many human tumors carry missense mutations in the TP53 gene, encoding p53. Typically, the affected tumor cells accumulate excessive amounts of the mutant p53 protein. Various lines of evidence indicate that, in addition to abrogating the tumor suppressor functions of wild-type p53, t...
متن کاملLinking Long Noncoding RNAs to Function
Mouse embryonic fibroblasts isolated from females lacking Xist intron 1 display normal Xist RNA coating. Image courtesy of K. Plath. Where Do Phenotypes eXIST? Xist encodes a lncRNA that is responsible for mediating X chromosome inactivation (XCI) to achieve dosage compensation in mammalian females. Previous work has indicated that binding of pluripotency factors, such as Oct4, Sox2, and Nanog,...
متن کاملDecapping of long noncoding RNAs regulates inducible genes.
Decapping represents a critical control point in regulating expression of protein coding genes. Here, we demonstrate that decapping also modulates expression of long noncoding RNAs (lncRNAs). Specifically, levels of >100 lncRNAs in yeast are controlled by decapping and are degraded by a pathway that occurs independent of decapping regulators. We find many lncRNAs degraded by DCP2 are expressed ...
متن کاملLong Noncoding RNAs
Ma Recent studies suggest that the majority of the human genome is transcribed, but only about 2% accounts for proteincoding exons. Long noncoding RNAs (lncRNAs) constitute a heterogenic class of RNAs that includes, for example, intergenic lncRNAs, antisense transcripts, and enhancer RNAs. Moreover, alternative splicing can lead to the formation of circular RNAs. In support of putative function...
متن کاملOncogenomic Approaches in Exploring Gain of Function of Mutant p53
Cancer is caused by the spatial and temporal accumulation of alterations in the genome of a given cell. This leads to the deregulation of key signalling pathways that play a pivotal role in the control of cell proliferation and cell fate. The p53 tumor suppressor gene is the most frequent target in genetic alterations in human cancers. The primary selective advantage of such mutations is the el...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Neuro-oncology
سال: 2022
ISSN: ['1523-5866', '1522-8517']
DOI: https://doi.org/10.1093/neuonc/noac209.156