Copycat Layout: Network layout alignment via Cytoscape Automation

نویسندگان
چکیده

برای دانلود باید عضویت طلایی داشته باشید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Automation of IC layout with analog constraints

| A methodology for the automatic synthesis of full-custom IC layout with analog constraints is presented. The methodology guarantees that all performance constraints are met when feasible, or otherwise infeasibil-ity is detected as soon as possible, thus providing a robust and eecient design environment. In the proposed approach, performance speciications are translated into lower level bounds...

متن کامل

GOlorize: a Cytoscape plug-in for network visualization with Gene Ontology-based layout and coloring

UNLABELLED We have implemented a graph layout algorithm that exposes Gene Ontology (GO) class structure on the network nodes. It can be used in conjunction with BiNGO plug-in to Cytoscape, which finds the GO categories over-represented in a given network. Our plug-in, named GOlorize, first highlights the class members with category-specific color-coding and then constructs an enhanced visualiza...

متن کامل

Seeded Tree Alignment and Planar Tanglegram Layout

The optimal transformation of one tree into another by means of elementary edit operations is an important algorithmic problem that has several interesting applications to computational biology. Here we introduce a constrained form of this problem in which a partial mapping of a set of nodes (the “seeds”) in one tree to a corresponding set of nodes in the other tree is given, and present effici...

متن کامل

Formula Layout Formula Layout

Both the quality of the results of TEX s formula layout algorithm and the complexity of its description in the TEXbook are hard to beat The algorithm is verbally described as an imperative program with very complex control ow and complicated manipulations of the data structures representing formulae In a forthcoming textbook we describe TEX s formula layout algorithm as a functional program tra...

متن کامل

IPRAIL - intellectual property reuse-based analog IC layout automation

This paper presents a computer-aided design tool, IPRAIL, which automatically retargets existing analog layouts for technology migration and new specifications. The reuse-based methodology adopted in IPRAIL utilizes expert designer knowledge embedded in analog layouts. IPRAIL automatically extracts analog circuit and layout intellectual properties as templates, incorporates new technology desig...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

ژورنال

عنوان ژورنال: F1000Research

سال: 2018

ISSN: 2046-1402

DOI: 10.12688/f1000research.15144.1