BIR Pipeline for Preparation of Phylogenomic Data
نویسندگان
چکیده
منابع مشابه
BIR Pipeline for Preparation of Phylogenomic Data
SUMMARY We present a pipeline named BIR (Blast, Identify and Realign) developed for phylogenomic analyses. BIR is intended for the identification of gene sequences applicable for phylogenomic inference. The pipeline allows users to apply their own manually curated sequence alignments (seed) in search for homologous genes in sequence databases and available genomes. BIR automatically adds the id...
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Benchmark datasets for phylogenomic pipeline validation, applications for foodborne pathogen surveillance
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ژورنال
عنوان ژورنال: Evolutionary Bioinformatics
سال: 2015
ISSN: 1176-9343,1176-9343
DOI: 10.4137/ebo.s10189