Best Linear Unbiased Prediction of Genomic Breeding Values Using a Trait-Specific Marker-Derived Relationship Matrix
نویسندگان
چکیده
منابع مشابه
Best Linear Unbiased Prediction of Genomic Breeding Values Using a Trait-Specific Marker-Derived Relationship Matrix
BACKGROUND With the availability of high density whole-genome single nucleotide polymorphism chips, genomic selection has become a promising method to estimate genetic merit with potentially high accuracy for animal, plant and aquaculture species of economic importance. With markers covering the entire genome, genetic merit of genotyped individuals can be predicted directly within the framework...
متن کاملA Comparison of the Sensitivity of the BayesC and Genomic Best Linear Unbiased Prediction(GBLUP) Methods of Estimating Genomic Breeding Values under Different Quantitative Trait Locus(QTL) Model Assumptions
The objective of this study was to compare the accuracy of estimating and predicting breeding values using two diverse approaches, GBLUP and BayesC, using simulated data under different quantitative trait locus(QTL) effect distributions. Data were simulated with three different distributions for the QTL effect which were uniform, normal and gamma (1.66, 0.4). The number of QTL was assumed to be...
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Genetic evaluation by best linear unbiased prediction (BLUP) requires modeling genetic means, variances, and covariances. This paper presents theory to model means, variances, and covariances in a multibreed population, given marker and breed information, in the presence of gametic disequilibrium between the marker locus (ML) and linked quantitative trait locus (MQTL). Theory and algorithms are...
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In order to have successful application of genomic selection, reference population and marker density should be chosen properly. This study purpose was to investigate the accuracy of genomic estimated breeding values in terms of low (5K), intermediate (50K) and high (777K) densities in the simulated populations, when different scenarios were applied about the reference populations selecting. Af...
متن کاملBest Linear Unbiased Prediction of Performance and Breeding Value
Introduction Genetic progress in traits of economic importance has been impressive during the past few decades. This has been due to a combination of (1) selection, primarily on additive genetic merit, (2) changes in breed structure, and (3) crossbreeding; the relative importance of these factors varying from species to species. This paper is concerned with the first of these factors and is res...
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ژورنال
عنوان ژورنال: PLoS ONE
سال: 2010
ISSN: 1932-6203
DOI: 10.1371/journal.pone.0012648