BEST: Binding-site Estimation Suite of Tools
نویسندگان
چکیده
منابع مشابه
BEST: Binding-site Estimation Suite of Tools
SUMMARY The purpose of our Binding-site Estimation Suite of Tools (BEST) is two-fold: to provide a platform for using and comparing different motif-finding programs for transcription factor binding site prediction, and to improve the accuracy of these predictions by further optimization. Our software package BEST includes four commonly used motif-finding programs: AlignACE, BioProspector, CONSE...
متن کاملA Suite of Shallow Processing Tools for Portuguese: LX-Suite
In this paper we present LX-Suite, a set of tools for the shallow processing of Portuguese. This suite comprises several modules, namely: a sentence chunker, a tokenizer, a POS tagger, featurizers and lemmatizers.
متن کاملTest Suite Design for Code Generation Tools
• General approach for the systematic verification of code generators • Seamless test case derivation (process) based on formal specification (i.e. graph transformation rule) • A method is suggested to create test input data for model and code using automated structural test • Results are suitable for making general assumptions about whether or not the code generator’s behaviour is correct Cont...
متن کاملROntoTools: The R Onto-Tools suite
This package is indented to be the R implementation of the web-based data mining and analysis suite of tools called Onto-Tools [10, 6, 5, 7, 8, 5, 12, 9, 4, 8, 9, 2, 9, 13, 3, 11]. Among these, Onto-Express (OE) was the first publicly available tool for the GO profiling of high throughput data and Pathway-Express (PE) the first tool to perform analysis of signaling pathways using important biol...
متن کاملCluster Command & Control (C3) Tools Suite
The computation power of PC clusters running the Linux operating system rivals that of supercomputers of just a few years ago at a fraction of the purchase price. However, the lack of good administration and application tools represents a hidden operation cost that is often overlooked when proposing a cluster. This paper presents a number of command line tools developed at Oak Ridge National La...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Bioinformatics
سال: 2005
ISSN: 1367-4803,1460-2059
DOI: 10.1093/bioinformatics/bti425