AncestrySNPminer: A bioinformatics tool to retrieve and develop ancestry informative SNP panels
نویسندگان
چکیده
منابع مشابه
Ancestry informative marker panels for African Americans based on subsets of commercially available SNP arrays.
Admixture mapping is a widely used method for localizing disease genes in African Americans. Most current methods for inferring ancestry at each locus in the genome use a few thousand single nucleotide polymorphisms (SNPs) that are very different in frequency between West Africans and European Americans, and that are required to not be in linkage disequilibrium in the ancestral populations. Mod...
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A protocol for the identification of Ancestry Informative Markers (AIMs) from genome-wide Single Nucleotide Polymorphism (SNP) data is proposed. The protocol consists of three main steps: identification of potential positive selection regions via F(ST) extremity measurement, SNP screening via two-stage attribute selection and classification model construction using a Naïve Bayes classifier. The...
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ژورنال
عنوان ژورنال: Genomics
سال: 2012
ISSN: 0888-7543
DOI: 10.1016/j.ygeno.2012.05.003