An improved protein structure evaluation using a semi-empirically derived structure property
نویسندگان
چکیده
منابع مشابه
Protein structure validation using a semi-empirical method
Current practice of validating predicted protein structural model is knowledge-based where scoring parameters are derived from already known structures to obtain decision on validation out of this structure information. For example, the scoring parameter, Ramachandran Score gives percentage conformity with steric-property higher value of which implies higher acceptability. On the other hand, Fo...
متن کاملRaptorX-Property: a web server for protein structure property prediction
RaptorX Property (http://raptorx2.uchicago.edu/StructurePropertyPred/predict/) is a web server predicting structure property of a protein sequence without using any templates. It outperforms other servers, especially for proteins without close homologs in PDB or with very sparse sequence profile (i.e. carries little evolutionary information). This server employs a powerful in-house deep learnin...
متن کاملBlast Mitigation Analysis of Semi-Buried Structure
Semi-buried structures are most commonly used at first line of defense along the border between two countries. This demands investigation of their dynamic behaviour under blast loading. Herein, a semi-buried structure with foam sandwiched walls and buttresses to reduce the effect of blast is analysed. The effect of provision of different configurations of buttresses and foam core between two la...
متن کاملSTRIKE: evaluation of protein MSAs using a single 3D structure
MOTIVATION Evaluating alternative multiple protein sequence alignments is an important unsolved problem in Biology. The most accurate way of doing this is to use structural information. Unfortunately, most methods require at least two structures to be embedded in the alignment, a condition rarely met when dealing with standard datasets. RESULT We developed STRIKE, a method that determines the...
متن کاملA Study on Structure and Property of Special Sulfonated Petroleum as a Complicated Anionic Surfactant
Alkaline/surfactant/polymer (ASP) flooding has been extensively applied to enhancing oil recovery. As an oil displacement agent, pe1troleum sulfonate (PS) is widely used in ASP pilot experiments. It is very important to find a petroleum sulfonate with a high interfacial activity and low adsorption loss. Anionic surfactant petroleum sulfonate is synthesized in a single-tube film sulfonation reac...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: BMC Structural Biology
سال: 2018
ISSN: 1472-6807
DOI: 10.1186/s12900-018-0097-0