A Filtering Algorithm for Efficient Retrieving of DNA Sequence
نویسندگان
چکیده
منابع مشابه
A Genetic Algorithm for Retrieving Sequence Strategies
We consider the problem of finding sequence strategies in time-series databases. Users are often interested in finding out when a sequence will change from one state to another state so that some corresponding actions may be performed. A sequence strategy aims to predict the future trends of a sequence based on its current behaviors, and to give user some suggestions. A sequence strategy contai...
متن کاملA REPORT OF RAPID AND EFFICIENT METHOD FOR MITOCHONDRIAL DNA
Based on the similarity of prokaryotic DNA to that of mitochondrial DNA, a rapid and efficient method for DNA purification from mitochondrial extracts obtained from different sources, was carried out based on the modification method described by Marmur (1983) which resulted in a high degree of purity (A260/A280=2). In addition we have applied the same technique for the first time to purify...
متن کاملA New Algorithm for DNA Sequence Assembly
Since the advent of rapid DNA sequencing methods in 1976, scientists have had the problem of inferring DNA sequences from sequenced fragments. Shotgun sequencing is a well-established biological and computational method used in practice. Many conventional algorithms for shotgun sequencing are based on the notion of pairwise fragment overlap. While shotgun sequencing infers a DNA sequence given ...
متن کاملEfficient and Scalable Sequence-Based XML Filtering
The ubiquitous adoption of XML as the standard of data exchange over the web has led to increased interest in building efficient and scalable XML publish-subscribe (pub-sub) systems. The central function of an XML-based pub-sub system is to perform XML filtering efficiently, i.e. identify those XPath expressions that have a match in a streaming XML document. In this paper, we propose a new sequ...
متن کاملA MODEL FOR THE BASIC HELIX- LOOPHELIX MOTIF AND ITS SEQUENCE SPECIFIC RECOGNITION OF DNA
A three dimensional model of the basic Helix-Loop-Helix motif and its sequence specific recognition of DNA is described. The basic-helix I is modeled as a continuous ?-helix because no ?-helix breaking residue is found between the basic region and the first helix. When the basic region of the two peptide monomers are aligned in the successive major groove of the cognate DNA, the hydrophobi...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: International Journal of Computer Theory and Engineering
سال: 2009
ISSN: 1793-8201
DOI: 10.7763/ijcte.2009.v1.16