A cortical surface-based geodesic distance package for Python

Project: Heat kernel construction on cortical surface using geodesic distance

DeBaCl: A Python Package for Interactive DEnsity-BAsed CLustering

The level set tree approach of Hartigan (1975) provides a probabilistically based and highly interpretable encoding of the clustering behavior of a dataset. By representing the hierarchy of data modes as a dendrogram of the level sets of a density estimator, this approach offers many advantages for exploratory analysis and clustering, especially for complex and high-dimensional data. Several R ...

PYCHEM: a multivariate analysis package for python

UNLABELLED We have implemented a multivariate statistical analysis toolbox, with an optional standalone graphical user interface (GUI), using the Python scripting language. This is a free and open source project that addresses the need for a multivariate analysis toolbox in Python. Although the functionality provided does not cover the full range of multivariate tools that are available, it has...

DREAMTools: a Python package for scoring collaborative

DREAM challenges are community competitions designed to advance computational methods and address fundamental questions in system biology and translational medicine. Each challenge asks participants to develop and apply computational methods to either predict unobserved outcomes or to identify unknown model parameters given a set of training data. Computational methods are evaluated using an au...

Geodesic Distance based Fuzzy Clustering

Clustering is a widely applied tool of data mining to detect the hidden structure of complex multivariate datasets. Hence, clustering solves two kinds of problems simultaneously, it partitions the datasets into cluster of objects that are similar to each other and describes the clusters by cluster prototypes to provide some information about the distribution of the data. In most of the cases th...