نتایج جستجو برای: RNA-sequencing

تعداد نتایج: 355158  

Journal: :progress in biological sciences 2014
samaneh saadat zhaleh safikhani kambiz badie mehdi sadeghi

given the importance of transcriptome analysis in various biological studies and considering thevast amount of whole transcriptome sequencing data, it seems necessary to develop analgorithm to assemble transcriptome data. in this study we propose an algorithm fortranscriptome assembly in the absence of a reference genome. first, the contiguous sequencesare generated using de bruijn graph with d...

RNA-sequencing is a new method of transcriptome characterization of organisms. Based on identity and relatedness, there are large genetic variations among different cattle breeds. The goal of the current study was to sequence the transcriptome of Guilan native cow and compare with available reference genome using RNA-sequencing method. Blood samples were collected from 14 Guilan native cows and...

Journal: :Biochem 2022

It is commonly understood that RNA-binding proteins crucially determine the fate of their target RNAs. Vice versa, RNAs are becoming increasingly recognized for functions in protein regulation and dynamics RNA-protein complexes. Long non-coding emerging as potent regulators exert unknown properties moonlighting functions. A vast array RNA- protein-centric techniques have been developed identifi...

Soybean, one of the most important sources of edible oil and protein in the world, is exposed to various environmental biotic and abiotic stresses. These stresses can negatively impact the quality and quantity of soybean production. This study aimed to identify genes that express circular RNAs in response to low phosphorus and nitrogen stresses in soybean roots. Soybean seeds were grown under d...

اوسطی آشتیانی, زهرا, توکلی بزاز, جواد, سلامی, سید علیرضا, پورمند, غلامرضا, پورمند, محمد رضا,

Background: Aberrant pre-mRNA alternative splicing is a common event in cancer cells. Many abnormally spliced RNA variants have been observed in tumor cells and they can be used as biomarkers or therapeutic targets in new drug design. Increasing our knowledge in understanding the mechanisms of alternative pre-mRNA splicing for cancer-related genes and determination of cancer specific isoforms a...

پایان نامه :وزارت علوم، تحقیقات و فناوری - دانشگاه فردوسی مشهد - دانشکده کشاورزی 1393

میکرو rnaها (micrornas) مولکول های rna تک رشته ای بطول تقریبی 23-21 نوکلئوتید هستند که از برش ساختمان های سنجاق سری ایجاد شده توسط rna های غیر کد شونده بوجود می آیند. این مولکول ها در فرایندهای مختلف سلولی نظیر نمو، انتقال سیگنال، تخریب پروتئین، پاسخ به تهاجم بیمارگرها و تنش های محیطی نقش دارند. ازجمله تنش های محیطی که نقش موثری در توزیع و پراکنش گیاهان در مناطق مختلف دارد، تنش دمایی است. مطالع...

Journal: :Cold Spring Harbor Protocols 2015

Journal: :Bioinformatics and Biology Insights 2015

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