The Escherichia coli low-copy-number plasmid R1 contains a segregation machinery composed of parC, ParR and parM. The R1 centromere-like site parC contains two separate sets of repeats. By atomic force microscopy (AFM) we show here that ParR molecules bind to each of the 5-fold repeated iterons separately with the intervening sequence unbound by ParR. The two ParR protein complexes on parC do n...

For Atlantic salmon, the gastrointestinal tract is the site of food digestion and nutrient uptake, a regulatory site for ion and water balance as well as a barrier against invading pathogens. During the parr–smolt transformation and subsequent seawater (SW) transfer, major changes occur in the intestine. A global shortage of fish oils (FO) for feed production is estimated to appear within a few...

While nonanadromous males (stream-resident and/or mature male parr) contribute to reproduction in anadromous salmonids, little is known about their impacts on key population genetic parameters. Here, we evaluated the contribution of Atlantic salmon mature male parr to the effective number of breeders (Nb) using both demographic (variance in reproductive success) and genetic (linkage disequilibr...

The crypsis hypothesis of salmonid parr coloration and behaviour is evaluated in light ot the criteria for protective resemblance. A review of the literature indicates that salmonid parr coloration and behaviour correspond to a cryptic interpretation. Experiments on coho salmon, Oncorhynchus kisutch, parr substrate colour preference indicate that the behavioural correlate of appropriate backgro...

In lymphoid neoplasia, molecular assays to confirm clonality rely on the fact that lymphoid cells normally contain DNA regions with unique sequences, resulting from recombination of the V, D, and J genes. The purpose of this study was to determine the utility of polymerase chain reaction (PCR) for antigen receptor rearrangements (PARR) for molecular staging and predicting prognosis in canine ly...

Juvenile stages of rainbow trout, smaller parr and older juveniles, termed smolts, show differences in red muscle contractile properties: parr red muscle has faster kinetics and a faster maximum shortening velocity than smolt red muscle. A developmental reduction in the number of MHC isoforms as detected by SDS-PAGE between parr and smolt has also been observed. To investigate whether this shif...

Nocturnal underwater counts of Atlantic salmon Salmo salar parr were made on four consecutive occasions (two lunar cycles, samplings at both the full and new moon) at four 40m long sites in the Sainte-Marguerite River, Québec, Canada, between 30 June and 14 August 2003. Atlantic salmon parr counts did not differ significantly between moon phases. Cloud cover ranged from 0 to 100% during the stu...

The intestine is one of the major osmoregulatory organs in fish. During the salmon parr–smolt transformation, the intestine must change its functions from the freshwater (FW) role of preventing water inflow, to the seawater (SW) role of actively absorbing ions and water. This development can be assessed as an increased intestinal fluid transport (Jv) during the parr– smolt transformation. The d...

We study interactive proofs in the framework of real number complexity as introduced by Blum, Shub, and Smale. The ultimate goal is to give a Shamir like characterization of the real counterpart IPR of classical IP. Whereas classically Shamir’s result implies IP = PSPACE = PAT = PAR, in our framework a major difficulty arises from the fact that in contrast to Turing complexity theory the real n...

Episodic acidification resulting in increased acidity and inorganic aluminum (Al(i)) is known to impact anadromous salmonids and has been identified as a possible cause of Atlantic salmon population decline. Sensitive life-stages such as smolts may be particularly vulnerable to impacts of short-term (days-week) acid/Al exposure, however the extent and mechanism(s) of this remain unknown. To det...