نتایج جستجو برای: tmrna

تعداد نتایج: 347  

Journal: :Nucleic acids research 2004
Yogita Mantri Kelly P. Williams

Prokaryotic chromosomes often contain islands, such as temperate phages or pathogenicity islands, delivered by site-specific integrases. Integration usually occurs within a tRNA or tmRNA gene, splitting the gene, yet sequences within the island restore the disrupted gene. The regenerated RNA gene and the displaced fragment of that gene thus mark the endpoints of the island. We applied this prin...

Journal: :Nucleic acids research 2002
Kelly P Williams

Most classical integrases of prokaryotic genetic elements specify integration into tRNA or tmRNA genes. Sequences shared between element and host integration sites suggest that crossover can occur at any of three sublocations within a tRNA gene, two with flanking symmetry (anticodon-loop and T-loop tDNA) and the third at the asymmetric 3' end of the gene. Integrase phylogeny matches this classi...

Journal: :Journal of bacteriology 2014
Kenneth C Keiler Heather A Feaga

Problems during gene expression can result in a ribosome that has translated to the 3' end of an mRNA without terminating at a stop codon, forming a nonstop translation complex. The nonstop translation complex contains a ribosome with the mRNA and peptidyl-tRNA engaged, but because there is no codon in the A site, the ribosome cannot elongate or terminate the nascent chain. Recent work has illu...

Journal: :Genetics and molecular research : GMR 2016
W Wurihan W Wunier H Li L F Fan M Morigen

The trans-translation pathway, mediated by the transfer messenger RNA (tmRNA; encoded by the ssrA gene) and the SmpB protein (tmRNA-binding protein expressed in Salmonella enterica), which is conserved in bacteria, is required for various cellular processes. A previous study has shown that trans-translation is required to ensure timely (non-delayed) dnaA transcription and consequent initiation ...

Journal: :Nucleic Acids Research 2006
Ebbe Sloth Andersen Magnus Alm Rosenblad Niels Larsen Jesper Cairo Westergaard Jody Burks Iwona K. Wower Jacek Wower Jan Gorodkin Tore Samuelsson Christian Zwieb

Maintained at the University of Texas Health Science Center at Tyler, Texas, the tmRNA database (tmRDB) is accessible at the URL http://psyche.uthct.edu/dbs/tmRDB/tmRDB.html with mirror sites located at Auburn University, Auburn, Alabama (http://www.ag.auburn.edu/mirror/tmRDB/) and the Royal Veterinary and Agricultural University, Denmark (http://tmrdb.kvl.dk/). The signal recognition particle ...

Journal: :Frontiers in Microbiology 2014

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