Gene-derived simple sequence repeats (genic SSRs), also known as functional markers, are often preferred over random genomic markers because they represent variation in gene coding and/or regulatory regions. We characterized 544 genic SSR loci derived from 138 candidate genes involved in wood formation, distributed throughout the genome of Populus tomentosa, a key ecological and cultivated wood...

comparative assessment of genetic diversity of 122 durum wheat genotypes (triticum turgidum l. var. durum) was performed using 73 ssap polymorphic fragments, 123 aflp polymorphic loci and 104 ssr alleles. ssap and aflp data showed a clear demarcation between the cultivars and landraces and ssr data classified cultivars and landraces according to their origin. furthermore, the estimated genetic ...

When fused to the ligand binding domain (LBD) of steroid hormone nuclear receptors, site-specific recombinases (SSRs) acquire a ligand-dependent activity. Here, we describe the use of SSR-LBD fusion proteins in an inducible expression system, introduced into cells in a single step. A single transgene contains a constitutively active, bi-directional enhancer/promoter, which directs expression, o...

The experiment was conducted to investigate the parental diversity along rice genome and understand screen out SSR markers-indicated polymorphism between two indica (Oryza sativa L.) cultivars. Namely K343, most well-liked variety in hill zone of Jammu Region, RML22, a line created at IRRI, Philippines. study is select polymorphic markers (Simple Sequence Repeat- SSR) associated with ecologies ...

Microsatellites, or simple sequence repeats (SSRs), especially those with long-core motifs (tri-, tetra-, penta-, and hexa-nucleotide) represent an excellent tool for DNA fingerprinting. SSRs with long-core motifs are preferred since neighbor alleles are more easily separated and identified from each other, which render the interpretation of electropherograms and the true alleles more reliable....

Lentil, as an economical source of protein, minerals and vitamins, plays important role in nutritional security of the common man. Grown mainly in West Asia, North Africa (WANA) region and South Asia, it suffers from several biotic stresses such as wilt, rust, blight and broomrape. Lentil rust caused by autoecious fungus Uromyces viciae fabae (Pers.) Schroet is a serious lentil disease in Alger...

Orchardgrass (Dactylis glomerata L.), is a well-known perennial forage species; however, rust diseases have caused a noticeable reduction in the quality and production of orchardgrass. In this study, genetic diversity was assessed and the marker-trait associations for rust were examined using 18 EST-SSR and 21 SCoT markers in 75 orchardgrass accessions. A high level of genetic diversity was det...

The brown planthopper (BPH), Nilaparvata lugens Stål, is a serious insect pest of rice (Oryza saliva L.). We have determined the chromosomal location of a BPH resistance gene in rice using SSR and RFLP techniques. A rice line 'B14', derived from the wild rice Oryza latifolia, showed high resistance to BPH. For tagging the resistance gene in 'B14X', an F2 population and a recombinant inbred (RI)...

The molecular marker (SSR) has been used to investigate the markers associated with the agronomic traits including days to 50% flowering, tube ring time, days to maturity, plant height, the number of main stems per plant, the number of tubers per plant, dry matter content, main stem diameter, a single tuber weight, average single tuber weight, and the total yield in potato genotypes. Ten primer...